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    SETD9 SET domain containing 9 [ Gallus gallus (chicken) ]

    Gene ID: 770222, updated on 3-Dec-2024

    Summary

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    Official Symbol
    SETD9provided by CGNC
    Official Full Name
    SET domain containing 9provided by CGNC
    Primary source
    CGNC:10914
    See related
    Ensembl:ENSGALG00010013106
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C5orf35; CZH5ORF35
    Orthologs
    human mouse all
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    Genomic context

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    See SETD9 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (18007788..18013788)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (18007788..18013788)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107051945 Neighboring gene uncharacterized LOC124417507 Neighboring gene mitogen-activated protein kinase kinase kinase 1 Neighboring gene MIER family member 3 Neighboring gene uncharacterized LOC121108504

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SET domain-containing protein 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      18007788..18013788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025144857.3 → XP_025000625.1  SET domain-containing protein 9 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YQB1
      Related
      ENSGALP00010018342.1, ENSGALT00010031423.1
      Conserved Domains (1) summary
      pfam00856
      Location:266 → 299
      SET; SET domain

    2. XM_001233555.7 → XP_001233556.3  SET domain-containing protein 9 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YQB1
      Conserved Domains (1) summary
      pfam00856
      Location:240 → 273
      SET; SET domain

    3. XM_004937248.5 → XP_004937305.2  SET domain-containing protein 9 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YHJ5
      Related
      ENSGALP00010018340.1, ENSGALT00010031420.1
      Conserved Domains (1) summary
      pfam00856
      Location:258 → 291
      SET; SET domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      18007788..18013788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046935560.1 → XP_046791516.1  SET domain-containing protein 9 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YQB1

    2. XM_046935561.1 → XP_046791517.1  SET domain-containing protein 9 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YQB1

    3. XM_046935559.1 → XP_046791515.1  SET domain-containing protein 9 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YHJ5
    Nucleotide Protein Strain
    Heading Accession and Version

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