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    HIVEP2 HIVEP zinc finger 2 [ Gallus gallus (chicken) ]

    Gene ID: 421672, updated on 17-Aug-2024

    Summary

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    Symbol
    HIVEP2provided by CGNC
    Full Name
    HIVEP zinc finger 2provided by CGNC
    Primary source
    CGNC:10330
    See related
    Ensembl:ENSGALG00010005758
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See HIVEP2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (52332530..52459133)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (52239070..52365526)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene adenosine deaminase, tRNA specific 2 Neighboring gene androgen induced 1 Neighboring gene uncharacterized LOC121110497 Neighboring gene uncharacterized LOC101751314 Neighboring gene uncharacterized LOC121110203

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor HIVEP2
    Names
    human immunodeficiency virus type I enhancer binding protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      52332530..52459133
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046939726.1 → XP_046795682.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    2. XM_046939733.1 → XP_046795689.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    3. XM_046939730.1 → XP_046795686.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    4. XM_046939725.1 → XP_046795681.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    5. XM_046939732.1 → XP_046795688.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    6. XM_046939731.1 → XP_046795687.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    7. XM_004935681.5 → XP_004935738.2  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    8. XM_015284201.4 → XP_015139687.2  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    9. XM_015284198.4 → XP_015139684.2  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    10. XM_040698470.2 → XP_040554404.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    11. XM_046939734.1 → XP_046795690.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    12. XM_046939729.1 → XP_046795685.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    13. XM_040698467.2 → XP_040554401.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    14. XM_046939728.1 → XP_046795684.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    15. XM_040698469.2 → XP_040554403.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    16. XM_046939735.1 → XP_046795691.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29
      Related
      ENSGALP00010008121.1, ENSGALT00010013728.1

    17. XM_040698468.2 → XP_040554402.1  transcription factor HIVEP2

      UniProtKB/TrEMBL
      A0A8V0XT29

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      52239070..52365526
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046915125.1 → XP_046771081.1  transcription factor HIVEP2

    2. XM_046915131.1 → XP_046771087.1  transcription factor HIVEP2

    3. XM_046915128.1 → XP_046771084.1  transcription factor HIVEP2

    4. XM_046915124.1 → XP_046771080.1  transcription factor HIVEP2

    5. XM_046915130.1 → XP_046771086.1  transcription factor HIVEP2

    6. XM_046915129.1 → XP_046771085.1  transcription factor HIVEP2

    7. XM_040668995.2 → XP_040524929.1  transcription factor HIVEP2

      Conserved Domains (5) summary
      PTZ00449
      Location:2132 → 2213
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00017
      Location:248 → 268
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1877 → 1897
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:1875 → 1897
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:261 → 285
      zf-H2C2_2; Zinc-finger double domain

    8. XM_040669003.2 → XP_040524937.1  transcription factor HIVEP2

      Conserved Domains (5) summary
      PTZ00449
      Location:2132 → 2213
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00017
      Location:248 → 268
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1877 → 1897
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:1875 → 1897
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:261 → 285
      zf-H2C2_2; Zinc-finger double domain

    9. XM_040669000.2 → XP_040524934.1  transcription factor HIVEP2

      Conserved Domains (5) summary
      PTZ00449
      Location:2132 → 2213
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00017
      Location:248 → 268
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1877 → 1897
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:1875 → 1897
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:261 → 285
      zf-H2C2_2; Zinc-finger double domain

    10. XM_040669002.2 → XP_040524936.1  transcription factor HIVEP2

      Conserved Domains (5) summary
      PTZ00449
      Location:2132 → 2213
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00017
      Location:248 → 268
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1877 → 1897
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:1875 → 1897
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:261 → 285
      zf-H2C2_2; Zinc-finger double domain

    11. XM_046915132.1 → XP_046771088.1  transcription factor HIVEP2

    12. XM_046915127.1 → XP_046771083.1  transcription factor HIVEP2

    13. XM_040668996.2 → XP_040524930.1  transcription factor HIVEP2

      Conserved Domains (5) summary
      PTZ00449
      Location:2132 → 2213
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00017
      Location:248 → 268
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1877 → 1897
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:1875 → 1897
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:261 → 285
      zf-H2C2_2; Zinc-finger double domain

    14. XM_046915126.1 → XP_046771082.1  transcription factor HIVEP2

    15. XM_040669001.2 → XP_040524935.1  transcription factor HIVEP2

      Conserved Domains (5) summary
      PTZ00449
      Location:2132 → 2213
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00017
      Location:248 → 268
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1877 → 1897
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:1875 → 1897
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:261 → 285
      zf-H2C2_2; Zinc-finger double domain

    16. XM_046915133.1 → XP_046771089.1  transcription factor HIVEP2

    17. XM_040668999.2 → XP_040524933.1  transcription factor HIVEP2

      Conserved Domains (5) summary
      PTZ00449
      Location:2132 → 2213
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00017
      Location:248 → 268
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:1877 → 1897
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:1875 → 1897
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:261 → 285
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein Strain
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