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    GJD4 gap junction protein delta 4 [ Gallus gallus (chicken) ]

    Gene ID: 420465, updated on 17-Aug-2024

    Summary

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    Symbol
    GJD4provided by CGNC
    Full Name
    gap junction protein delta 4provided by CGNC
    Primary source
    CGNC:5336
    See related
    Ensembl:ENSGALG00010004368
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See GJD4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (12776471..12783925, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (12804399..12811859, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101749139 Neighboring gene uncharacterized LOC121110102 Neighboring gene frizzled class receptor 8 Neighboring gene cyclin Y Neighboring gene uncharacterized LOC107052602 Neighboring gene translation initiation factor IF-2-like Neighboring gene cAMP responsive element modulator

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell communication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of connexin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gap junction delta-4 protein
    Names
    connexin40.1
    gap junction protein, delta 4, 40.1kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      12776471..12783925 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015282128.4 → XP_015137614.1  gap junction delta-4 protein

      UniProtKB/TrEMBL
      A0A8V0XCV7, E1C7P9
      Related
      ENSGALP00010005961.1, ENSGALT00010010199.1
      Conserved Domains (1) summary
      pfam00029
      Location:4 → 229
      Connexin

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      12804399..12811859 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040665886.2 → XP_040521820.1  gap junction delta-4 protein

      UniProtKB/TrEMBL
      A0A8V0XCV7, E1C7P9
      Conserved Domains (1) summary
      pfam00029
      Location:4 → 229
      Connexin
    Nucleotide Protein Strain
    Heading Accession and Version

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