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    RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [ Gallus gallus (chicken) ]

    Gene ID: 424107, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RAPH1provided by CGNC
    Official Full Name
    Ras association (RalGDS/AF-6) and pleckstrin homology domains 1provided by CGNC
    Primary source
    CGNC:6585
    See related
    Ensembl:ENSGALG00010022033
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    LPD
    Orthologs
    human mouse all
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    Genomic context

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    See RAPH1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (13124670..13210266)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (13048644..13134434)

    Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene CD28 molecule Neighboring gene uncharacterized LOC101750642 Neighboring gene abl interactor 2 Neighboring gene cytochrome P450 family 20 subfamily A member 1 Neighboring gene microRNA 1659

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-associated and pleckstrin homology domains-containing protein 1
    Names
    lamellipodin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      13124670..13210266
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040703676.2 → XP_040559610.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZLF0
      Conserved Domains (3) summary
      cd01259
      Location:421 → 543
      PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
      cd16136
      Location:296 → 385
      RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
      pfam08580
      Location:1130 → 1274
      KAR9; Yeast cortical protein KAR9

    2. XM_040703673.2 → XP_040559607.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZLF0
      Conserved Domains (3) summary
      cd01259
      Location:421 → 543
      PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
      cd16136
      Location:296 → 385
      RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
      pfam08580
      Location:1130 → 1274
      KAR9; Yeast cortical protein KAR9

    3. XM_040703677.2 → XP_040559611.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZLF5
      Conserved Domains (3) summary
      cd01259
      Location:396 → 518
      PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
      cd16136
      Location:271 → 360
      RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
      pfam08580
      Location:1105 → 1249
      KAR9; Yeast cortical protein KAR9

    4. XM_046943854.1 → XP_046799810.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X4

    5. XM_046943852.1 → XP_046799808.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X1

    6. XM_040703674.2 → XP_040559608.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZLF0
      Related
      ENSGALP00010032267.1, ENSGALT00010053550.1
      Conserved Domains (3) summary
      cd01259
      Location:421 → 543
      PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
      cd16136
      Location:296 → 385
      RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
      pfam08580
      Location:1130 → 1274
      KAR9; Yeast cortical protein KAR9

    7. XM_046943853.1 → XP_046799809.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZLF5
      Related
      ENSGALP00010032272.1, ENSGALT00010053558.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      13048644..13134434
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040675826.2 → XP_040531760.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZLF0
      Conserved Domains (3) summary
      cd01259
      Location:421 → 543
      PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
      cd16136
      Location:296 → 385
      RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
      pfam08580
      Location:1130 → 1274
      KAR9; Yeast cortical protein KAR9

    2. XM_040675824.2 → XP_040531758.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZLF0
      Conserved Domains (3) summary
      cd01259
      Location:421 → 543
      PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
      cd16136
      Location:296 → 385
      RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
      pfam08580
      Location:1130 → 1274
      KAR9; Yeast cortical protein KAR9

    3. XM_040675827.2 → XP_040531761.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZLF5
      Conserved Domains (3) summary
      cd01259
      Location:396 → 518
      PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
      cd16136
      Location:271 → 360
      RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
      pfam08580
      Location:1105 → 1249
      KAR9; Yeast cortical protein KAR9

    4. XM_046921796.1 → XP_046777752.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X4

    5. XM_046921794.1 → XP_046777750.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X1

    6. XM_040675825.2 → XP_040531759.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZLF0
      Conserved Domains (3) summary
      cd01259
      Location:421 → 543
      PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
      cd16136
      Location:296 → 385
      RA_MRL_Lpd; Ras-associating (RA) domain found in the adapter protein lamellipodin (Lpd)
      pfam08580
      Location:1130 → 1274
      KAR9; Yeast cortical protein KAR9

    7. XM_046921795.1 → XP_046777751.1  ras-associated and pleckstrin homology domains-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZLF5
    Nucleotide Protein Strain
    Heading Accession and Version

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