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    MTM1 myotubularin 1 [ Gallus gallus (chicken) ]

    Gene ID: 422388, updated on 17-Aug-2024

    Summary

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    Symbol
    MTM1provided by CGNC
    Full Name
    myotubularin 1provided by CGNC
    Primary source
    CGNC:6923
    See related
    Ensembl:ENSGALG00010011485
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See MTM1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (17693665..17736064, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (17732509..17774988, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene CD99 molecule like 2 Neighboring gene myotubularin related protein 1 Neighboring gene mastermind like domain containing 1 Neighboring gene uncharacterized LOC121110617 Neighboring gene uncharacterized LOC112532284

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrion distribution IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle cell cellular homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myotubularin
    XP_004940917.1
    XP_040526725.1
    XP_040526726.1
    XP_040526727.1
    XP_040526728.1
    XP_040556111.1
    XP_040556112.1
    XP_046773360.1
    XP_046797099.1
    XP_420357.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      17693665..17736064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_420357.8 → XP_420357.2  myotubularin isoform X4

      UniProtKB/TrEMBL
      A0A8V0YDK1
      Conserved Domains (2) summary
      cd13355
      Location:44 → 143
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:160 → 486
      Myotub-related; Myotubularin-like phosphatase domain

    2. XM_004940860.5 → XP_004940917.1  myotubularin isoform X3

      UniProtKB/TrEMBL
      A0A8V0YDK1, E1BRL5
      Related
      ENSGALP00010015788.1, ENSGALT00010027564.1
      Conserved Domains (2) summary
      cd13355
      Location:44 → 143
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:160 → 486
      Myotub-related; Myotubularin-like phosphatase domain

    3. XM_040700178.2 → XP_040556112.1  myotubularin isoform X2

      UniProtKB/TrEMBL
      A0A8V0YDK1
      Conserved Domains (2) summary
      cd13355
      Location:44 → 143
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14591
      Location:223 → 475
      PTP-MTM1; protein tyrosine phosphatase-like domain of myotubularin phosphoinositide phosphatase 1

    4. XM_040700177.2 → XP_040556111.1  myotubularin isoform X1

      UniProtKB/TrEMBL
      A0A8V0YDK1
      Conserved Domains (2) summary
      cd13355
      Location:44 → 143
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14591
      Location:223 → 475
      PTP-MTM1; protein tyrosine phosphatase-like domain of myotubularin phosphoinositide phosphatase 1

    5. XM_046941143.1 → XP_046797099.1  myotubularin isoform X5

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      17732509..17774988 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040670794.2 → XP_040526728.1  myotubularin isoform X4

      UniProtKB/TrEMBL
      A0A8V0YDK1
      Conserved Domains (2) summary
      cd13355
      Location:44 → 143
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:160 → 486
      Myotub-related; Myotubularin-like phosphatase domain

    2. XM_040670793.2 → XP_040526727.1  myotubularin isoform X3

      UniProtKB/TrEMBL
      A0A8V0YDK1, E1BRL5
      Conserved Domains (2) summary
      cd13355
      Location:44 → 143
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:160 → 486
      Myotub-related; Myotubularin-like phosphatase domain

    3. XM_040670792.2 → XP_040526726.1  myotubularin isoform X2

      UniProtKB/TrEMBL
      A0A8V0YDK1
      Conserved Domains (2) summary
      cd13355
      Location:44 → 143
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14591
      Location:223 → 475
      PTP-MTM1; protein tyrosine phosphatase-like domain of myotubularin phosphoinositide phosphatase 1

    4. XM_040670791.2 → XP_040526725.1  myotubularin isoform X1

      UniProtKB/TrEMBL
      A0A8V0YDK1
      Conserved Domains (2) summary
      cd13355
      Location:44 → 143
      PH-GRAM_MTM1; Myotubularian 1 protein (MTM1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14591
      Location:223 → 475
      PTP-MTM1; protein tyrosine phosphatase-like domain of myotubularin phosphoinositide phosphatase 1

    5. XM_046917404.1 → XP_046773360.1  myotubularin isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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