U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    STUM stum, mechanosensory transduction mediator [ Gallus gallus (chicken) ]

    Gene ID: 421315, updated on 17-Aug-2024

    Summary

    Official Symbol
    STUMprovided by CGNC
    Official Full Name
    stum, mechanosensory transduction mediatorprovided by CGNC
    Primary source
    CGNC:7005
    See related
    Ensembl:ENSGALG00010017475
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C1ORF95; C3H1orf95
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See STUM in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (16631620..16668714, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (16546188..16583302, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene minichromosome maintenance 8 homologous recombination repair factor Neighboring gene cardiolipin synthase 1 Neighboring gene uncharacterized LOC121110397 Neighboring gene uncharacterized LOC100859360 Neighboring gene uncharacterized LOC121110399

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    protein stum homolog
    Names
    chromosome 3 C1orf95 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277538.1NP_001264467.1  protein stum homolog

      Status: PROVISIONAL

      Source sequence(s)
      BM486664
      Conserved Domains (2) summary
      PRK02597
      Location:751
      rpoC2; DNA-directed RNA polymerase subunit beta'; Provisional
      pfam15795
      Location:39122
      Spec3; Ectodermal ciliogenesis protein

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      16631620..16668714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015283634.4XP_015139120.1  protein stum homolog isoform X1

      Related
      ENSGALP00010024728.1, ENSGALT00010042204.1
      Conserved Domains (2) summary
      PRK02597
      Location:751
      rpoC2; DNA-directed RNA polymerase subunit beta'; Provisional
      pfam15795
      Location:39122
      Spec3; Ectodermal ciliogenesis protein

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      16546188..16583302 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046913698.1XP_046769654.1  protein stum homolog isoform X1