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    PLD5 phospholipase D family member 5 [ Gallus gallus (chicken) ]

    Gene ID: 421501, updated on 3-Dec-2024

    Summary

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    Symbol
    PLD5provided by CGNC
    Full Name
    phospholipase D family member 5provided by CGNC
    Primary source
    CGNC:8161
    See related
    Ensembl:ENSGALG00010008383
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PLD5 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (35038058..35368374)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (34946233..35272031)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene serologically defined colon cancer antigen 8 Neighboring gene uncharacterized LOC121113143 Neighboring gene centrosomal protein 170 Neighboring gene endogenous retrovirus group K member 10 Gag polyprotein-like Neighboring gene uncharacterized LOC124417801 Neighboring gene microRNA mir-1784b Neighboring gene microRNA 1784 Neighboring gene microtubule associated protein 1 light chain 3 gamma Neighboring gene exonuclease 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inactive phospholipase D5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001252016.2 → NP_001238945.1  inactive phospholipase D5 isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000063
      UniProtKB/TrEMBL
      A0A8V0Y2G1
      Conserved Domains (3) summary
      cd09146
      Location:19 → 182
      PLDc_vPLD5_1; Putative catalytic domain, repeat 1, of inactive veterbrate phospholipase PLD5
      cd09149
      Location:218 → 411
      PLDc_vPLD5_2; Putative catalytic domain, repeat 2, of inactive veterbrate phospholipase PLD5
      PHA02820
      Location:20 → 430
      PHA02820; phospholipase-D-like protein; Provisional

    2. NM_001397392.1 → NP_001384321.1  inactive phospholipase D5 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000063
      UniProtKB/TrEMBL
      A0A8V0Y007, E1C1H9
      Related
      ENSGALP00010011609.1, ENSGALT00010020061.1
      Conserved Domains (2) summary
      cd09146
      Location:110 → 273
      PLDc_vPLD5_1; Putative catalytic domain, repeat 1, of inactive veterbrate phospholipase PLD5
      cd09149
      Location:309 → 502
      PLDc_vPLD5_2; Putative catalytic domain, repeat 2, of inactive veterbrate phospholipase PLD5

    3. NM_001397393.1 → NP_001384322.1  inactive phospholipase D5 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000063
      UniProtKB/TrEMBL
      A0A8V0Y007
      Related
      ENSGALP00010011607.1, ENSGALT00010020059.1
      Conserved Domains (2) summary
      cd09146
      Location:49 → 212
      PLDc_vPLD5_1; Putative catalytic domain, repeat 1, of inactive veterbrate phospholipase PLD5
      cd09149
      Location:248 → 441
      PLDc_vPLD5_2; Putative catalytic domain, repeat 2, of inactive veterbrate phospholipase PLD5

    RNA

    1. NR_173702.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000063

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      35038058..35368374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040697105.2 → XP_040553039.1  inactive phospholipase D5 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y2G1
      Conserved Domains (2) summary
      cd09146
      Location:20 → 183
      PLDc_vPLD5_1; Putative catalytic domain, repeat 1, of inactive veterbrate phospholipase PLD5
      cd09149
      Location:219 → 412
      PLDc_vPLD5_2; Putative catalytic domain, repeat 2, of inactive veterbrate phospholipase PLD5

    2. XM_046938832.1 → XP_046794788.1  inactive phospholipase D5 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y007, E1C1H9

    RNA

    1. XR_006938652.1 RNA Sequence

    2. XR_006938653.1 RNA Sequence

    3. XR_006938654.1 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      34946233..35272031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046913898.1 → XP_046769854.1  inactive phospholipase D5 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y2G1

    2. XM_046913897.1 → XP_046769853.1  inactive phospholipase D5 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y007, E1C1H9

    RNA

    1. XR_006933945.1 RNA Sequence

    2. XR_006933946.1 RNA Sequence

    3. XR_006933947.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials