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    RNPEP arginyl aminopeptidase [ Gallus gallus (chicken) ]

    Gene ID: 421165, updated on 3-Dec-2024

    Summary

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    Official Symbol
    RNPEPprovided by CGNC
    Official Full Name
    arginyl aminopeptidaseprovided by CGNC
    Primary source
    CGNC:219
    See related
    Ensembl:ENSGALG00010026143
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RNPEP in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (653732..658740, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (622999..627993, complement)

    Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene importin 9 Neighboring gene leucine zipper like transcription regulator 1 Neighboring gene neuron navigator 1 Neighboring gene synaptotagmin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloaminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aminopeptidase B
    XP_015154357.1
    XP_040547260.2
    XP_040547261.2
    XP_419245.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      653732..658740 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_419245.8 → XP_419245.5  aminopeptidase B isoform X1

      UniProtKB/TrEMBL
      A0A8V1A0A4, A0A8V1A5H0
      Related
      ENSGALP00010039299.1, ENSGALT00010063672.1
      Conserved Domains (3) summary
      cd09599
      Location:21 → 469
      M1_LTA4H; Peptidase M1 family contains leukotriene A4 hydrolase
      TIGR02411
      Location:21 → 630
      leuko_A4_hydro; leukotriene A-4 hydrolase/aminopeptidase
      pfam09127
      Location:489 → 629
      Leuk-A4-hydro_C; Leukotriene A4 hydrolase, C-terminal

    2. XM_015298871.4 → XP_015154357.1  aminopeptidase B isoform X2

      UniProtKB/TrEMBL
      A0A8V1A5H0, A0A8V1AAK3
      Related
      ENSGALP00010039303.1, ENSGALT00010063683.1
      Conserved Domains (3) summary
      cd09599
      Location:21 → 469
      M1_LTA4H; Peptidase M1 family contains leukotriene A4 hydrolase
      TIGR02411
      Location:21 → 630
      leuko_A4_hydro; leukotriene A-4 hydrolase/aminopeptidase
      pfam09127
      Location:489 → 629
      Leuk-A4-hydro_C; Leukotriene A4 hydrolase, C-terminal

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      622999..627993 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040691327.2 → XP_040547261.2  aminopeptidase B isoform X1

      UniProtKB/TrEMBL
      A0A8V1A0A4, A0A8V1A5H0

    2. XM_040691326.2 → XP_040547260.2  aminopeptidase B isoform X2

      UniProtKB/TrEMBL
      A0A8V1A5H0, A0A8V1AAK3
    Nucleotide Protein Strain
    Heading Accession and Version

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