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    CENPE centromere protein E [ Gallus gallus (chicken) ]

    Gene ID: 422716, updated on 17-Aug-2024

    Summary

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    Symbol
    CENPEprovided by CGNC
    Full Name
    centromere protein Eprovided by CGNC
    Primary source
    CGNC:51810
    See related
    Ensembl:ENSGALG00010016956
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CENPE in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    45
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (60508378..60544955, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (60505367..60543000, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene CDGSH iron sulfur domain 2 Neighboring gene solute carrier family 9 member B2 Neighboring gene 3-hydroxybutyrate dehydrogenase 2 Neighboring gene radial spoke head protein 4 homolog A-like Neighboring gene C4orf47 homolog Neighboring gene coiled-coil domain containing 110

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables plus-end-directed microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centromere-associated protein E
    Names
    centromere protein E, 312kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      60508378..60544955 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_420670.8 → XP_420670.5  centromere-associated protein E isoform X2

      Conserved Domains (2) summary
      COG1196
      Location:729 → 1550
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01374
      Location:6 → 330
      KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup

    2. XM_015285601.4 → XP_015141087.2  centromere-associated protein E isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z615
      Related
      ENSGALP00010023932.1, ENSGALT00010040968.1
      Conserved Domains (2) summary
      COG1196
      Location:754 → 1575
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01374
      Location:6 → 330
      KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup

    3. XM_025150193.3 → XP_025005961.2  centromere-associated protein E isoform X3

      Conserved Domains (3) summary
      COG1196
      Location:754 → 1575
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1240 → 2004
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd01374
      Location:6 → 330
      KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup

    RNA

    1. XR_006939222.1 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      60505367..60543000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040671527.2 → XP_040527461.1  centromere-associated protein E isoform X4

      Conserved Domains (2) summary
      COG1196
      Location:714 → 1585
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd01374
      Location:6 → 330
      KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup
    Nucleotide Protein
    Heading Accession and Version

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