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    PECAM1 platelet and endothelial cell adhesion molecule 1 [ Gallus gallus (chicken) ]

    Gene ID: 771243, updated on 17-Aug-2024

    Summary

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    Symbol
    PECAM1provided by CGNC
    Full Name
    platelet and endothelial cell adhesion molecule 1provided by CGNC
    Primary source
    CGNC:2565
    See related
    Ensembl:ENSGALG00010029625
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PECAM1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (7472370..7501074, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (7067254..7095979, complement)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA76 Neighboring gene uncharacterized LOC112530030 Neighboring gene testis expressed 2 Neighboring gene mast cell immunoglobulin like receptor 1 Neighboring gene DNA polymerase gamma 2, accessory subunit Neighboring gene microRNA 3064 Neighboring gene DEAD-box helicase 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion via plasma-membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    platelet endothelial cell adhesion molecule
    Names
    platelet/endothelial cell adhesion molecule (CD31 antigen)
    platelet/endothelial cell adhesion molecule 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      7472370..7501074 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004946203.5 → XP_004946260.2  platelet endothelial cell adhesion molecule isoform X13

      UniProtKB/TrEMBL
      A0A8V1AN16, A0A8V1APJ3
      Related
      ENSGALP00010044327.1, ENSGALT00010071637.1
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    2. XM_040649756.2 → XP_040505690.1  platelet endothelial cell adhesion molecule isoform X11

      UniProtKB/TrEMBL
      A0A8V1AN16, A0A8V1APJ0
      Related
      ENSGALP00010044322.1, ENSGALT00010071632.1
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    3. XM_004946199.5 → XP_004946256.2  platelet endothelial cell adhesion molecule isoform X9

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    4. XM_040649751.2 → XP_040505685.1  platelet endothelial cell adhesion molecule isoform X7

      UniProtKB/TrEMBL
      A0A8V1AN16, A0A8V1AN19
      Related
      ENSGALP00010044324.1, ENSGALT00010071634.1
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    5. XM_004946198.5 → XP_004946255.2  platelet endothelial cell adhesion molecule isoform X8

      UniProtKB/TrEMBL
      A0A8V1AE79, A0A8V1AN16
      Related
      ENSGALP00010044321.1, ENSGALT00010071631.1
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    6. XM_040649750.2 → XP_040505684.1  platelet endothelial cell adhesion molecule isoform X6

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    7. XM_004946193.5 → XP_004946250.2  platelet endothelial cell adhesion molecule isoform X3

      UniProtKB/TrEMBL
      A0A8V1ALA8, A0A8V1AN16
      Related
      ENSGALP00010044320.1, ENSGALT00010071630.1
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    8. XM_040649749.2 → XP_040505683.1  platelet endothelial cell adhesion molecule isoform X2

      UniProtKB/TrEMBL
      A0A8V1AJK9, A0A8V1AN16
      Related
      ENSGALP00010044323.1, ENSGALT00010071633.1
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    9. XM_040649754.2 → XP_040505688.1  platelet endothelial cell adhesion molecule isoform X10

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    10. XM_004946194.5 → XP_004946251.2  platelet endothelial cell adhesion molecule isoform X5

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    11. XM_025141753.3 → XP_024997521.2  platelet endothelial cell adhesion molecule isoform X4

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    12. XM_004946188.5 → XP_004946245.2  platelet endothelial cell adhesion molecule isoform X1

      UniProtKB/TrEMBL
      A0A8V1AN16
      Related
      ENSGALP00010044319.1, ENSGALT00010071629.1
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    13. XM_015279912.4 → XP_015135398.2  platelet endothelial cell adhesion molecule isoform X12

      UniProtKB/TrEMBL
      A0A8V1AE85, A0A8V1AN16
      Related
      ENSGALP00010044326.1, ENSGALT00010071636.1
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      7067254..7095979 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040686404.2 → XP_040542338.1  platelet endothelial cell adhesion molecule isoform X13

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    2. XM_040686402.2 → XP_040542336.1  platelet endothelial cell adhesion molecule isoform X11

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    3. XM_040686393.2 → XP_040542327.1  platelet endothelial cell adhesion molecule isoform X9

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (4) summary
      pfam13895
      Location:313 → 391
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:401 → 473
      Ig_3; Immunoglobulin domain
      cd00096
      Location:432 → 438
      Ig; Ig strand C [structural motif]
      cl11960
      Location:33 → 117
      Ig; Immunoglobulin domain

    4. XM_040686391.2 → XP_040542325.1  platelet endothelial cell adhesion molecule isoform X7

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    5. XM_040686392.2 → XP_040542326.1  platelet endothelial cell adhesion molecule isoform X8

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (4) summary
      pfam13895
      Location:313 → 391
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:401 → 473
      Ig_3; Immunoglobulin domain
      cd00096
      Location:322 → 324
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:33 → 117
      Ig; Immunoglobulin domain

    6. XM_040686390.2 → XP_040542324.1  platelet endothelial cell adhesion molecule isoform X6

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    7. XM_040686387.2 → XP_040542321.1  platelet endothelial cell adhesion molecule isoform X3

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (4) summary
      pfam13895
      Location:313 → 391
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:401 → 473
      Ig_3; Immunoglobulin domain
      cd00096
      Location:322 → 324
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:33 → 117
      Ig; Immunoglobulin domain

    8. XM_040686386.2 → XP_040542320.1  platelet endothelial cell adhesion molecule isoform X2

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    9. XM_040686401.2 → XP_040542335.1  platelet endothelial cell adhesion molecule isoform X10

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    10. XM_040686389.2 → XP_040542323.1  platelet endothelial cell adhesion molecule isoform X5

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (1) summary
      smart00409
      Location:325 → 394
      IG; Immunoglobulin

    11. XM_040686388.2 → XP_040542322.1  platelet endothelial cell adhesion molecule isoform X4

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (4) summary
      pfam13895
      Location:313 → 391
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:401 → 473
      Ig_3; Immunoglobulin domain
      cd00096
      Location:322 → 324
      Ig; Ig strand A' [structural motif]
      cl11960
      Location:33 → 117
      Ig; Immunoglobulin domain

    12. XM_040686385.2 → XP_040542319.1  platelet endothelial cell adhesion molecule isoform X1

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (4) summary
      pfam13895
      Location:313 → 391
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:401 → 473
      Ig_3; Immunoglobulin domain
      cd00096
      Location:432 → 438
      Ig; Ig strand C [structural motif]
      cl11960
      Location:33 → 117
      Ig; Immunoglobulin domain

    13. XM_040686403.2 → XP_040542337.1  platelet endothelial cell adhesion molecule isoform X12

      UniProtKB/TrEMBL
      A0A8V1AN16
      Conserved Domains (4) summary
      pfam13895
      Location:313 → 391
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:401 → 473
      Ig_3; Immunoglobulin domain
      cd00096
      Location:432 → 438
      Ig; Ig strand C [structural motif]
      cl11960
      Location:33 → 117
      Ig; Immunoglobulin domain
    Nucleotide Protein Strain
    Heading Accession and Version

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