SUPV3L1 Suv3 like RNA helicase [Gallus gallus (chicken)] - Gene

Summary

Symbol: SUPV3L1provided by CGNC
Full Name: Suv3 like RNA helicaseprovided by CGNC
Primary source: CGNC:3082
See related: Ensembl:ENSGALG00010023214
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 6

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	6	NC_052537.1 (11587577..11601091)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	6	NC_052578.1 (11593726..11607318)

Chromosome 6 - NC_052537.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA helicase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables hydrolase activity, acting on acid anhydrides	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in RNA catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in mitochondrial RNA 3'-end processing	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of mitochondrial degradosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: ATP-dependent RNA helicase SUPV3L1, mitochondrial

Names: SUV3-like protein 1; suppressor of var1 3-like protein 1; suppressor of var1, 3-like 1

NP_001006498.1

EC 3.6.4.13

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001006498.1 → NP_001006498.1 ATP-dependent RNA helicase SUPV3L1, mitochondrial precursor

See identical proteins and their annotated locations for NP_001006498.1

Status: PROVISIONAL

Source sequence(s)

AJ720354

UniProtKB/Swiss-Prot

Q5ZJT0

UniProtKB/TrEMBL

A0A8V0ZZK3

Related

ENSGALP00010034338.1, ENSGALT00010056596.1

Conserved Domains (5) summary

smart00487
Location:175 → 297

DEXDc; DEAD-like helicases superfamily

COG0513
Location:259 → 465

SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]

cd00046
Location:194 → 301

DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

cd00079
Location:328 → 463

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

pfam12513
Location:614 → 655

SUV3_C; Mitochondrial degradasome RNA helicase subunit C terminal