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    CRYGN crystallin gamma N [ Gallus gallus (chicken) ]

    Gene ID: 428406, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CRYGNprovided by CGNC
    Official Full Name
    crystallin gamma Nprovided by CGNC
    Primary source
    CGNC:4644
    See related
    Ensembl:ENSGALG00010027125
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CRYGN in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (6266771..6273415, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (6264688..6271321, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene negative regulator of ubiquitin like proteins 1 Neighboring gene WD repeat domain 86 Neighboring gene Ras homolog enriched in brain Neighboring gene protein kinase AMP-activated non-catalytic subunit gamma 2 Neighboring gene uncharacterized LOC112531929 Neighboring gene microRNA mir-12239

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of eye lens IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lens development in camera-type eye IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in visual perception IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-crystallin N
    Names
    gammaN-crystallin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001166674.3 → NP_001160146.2  gamma-crystallin N

      See identical proteins and their annotated locations for NP_001160146.2

      Status: VALIDATED

      Source sequence(s)
      HAEL01009337, JAENSK010000035
      UniProtKB/TrEMBL
      D0FH75
      Conserved Domains (1) summary
      pfam00030
      Location:7 → 88
      Crystall; Beta/Gamma crystallin

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6266771..6273415 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040685987.2 → XP_040541921.1  gamma-crystallin N isoform X1

      UniProtKB/TrEMBL
      A0A8V1AES7
      Conserved Domains (1) summary
      smart00247
      Location:27 → 108
      XTALbg; Beta/gamma crystallins

    2. XM_040686010.2 → XP_040541944.1  gamma-crystallin N isoform X3

      Conserved Domains (2) summary
      smart00247
      Location:7 → 88
      XTALbg; Beta/gamma crystallins
      cl02528
      Location:96 → 134
      Crystall; Beta/Gamma crystallin

    3. XM_046925831.1 → XP_046781787.1  gamma-crystallin N isoform X1

      UniProtKB/TrEMBL
      A0A8V1AES7
      Related
      ENSGALP00010040025.1, ENSGALT00010065759.1

    4. XM_040685995.2 → XP_040541929.1  gamma-crystallin N isoform X2

      Conserved Domains (2) summary
      smart00247
      Location:27 → 108
      XTALbg; Beta/gamma crystallins
      cl02528
      Location:116 → 154
      Crystall; Beta/Gamma crystallin

    RNA

    1. XR_005854718.2 RNA Sequence

    2. XR_006935880.1 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6264688..6271321 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046911663.1 → XP_046767619.1  gamma-crystallin N isoform X3

    2. XM_046911662.1 → XP_046767618.1  gamma-crystallin N isoform X4

    3. XM_046911660.1 → XP_046767616.1  gamma-crystallin N isoform X1

    4. XM_046911661.1 → XP_046767617.1  gamma-crystallin N isoform X2

    RNA

    1. XR_006933434.1 RNA Sequence

    2. XR_006933435.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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