U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CACNA1H calcium voltage-gated channel subunit alpha1 H [ Gallus gallus (chicken) ]

    Gene ID: 416526, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    CACNA1Hprovided by CGNC
    Full Name
    calcium voltage-gated channel subunit alpha1 Hprovided by CGNC
    Primary source
    CGNC:3883
    See related
    Ensembl:ENSGALG00010017430
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CACNA1H in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (5242584..5444186, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (5237660..5439856, complement)

    Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054611 Neighboring gene B9 domain containing 1 Neighboring gene uncharacterized LOC121106781 Neighboring gene MAFF interacting protein (pseudogene) Neighboring gene C1q and TNF related 8

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cell-type homologies and the origins of the neocortex. Dugas-Ford J, et al. Proc Natl Acad Sci U S A, 2012 Oct 16. PMID 23027930, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables low voltage-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated sodium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion import IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in membrane depolarization during action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuronal action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated calcium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated sodium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    voltage-dependent T-type calcium channel subunit alpha-1H
    Names
    calcium channel, voltage-dependent, T type, alpha 1H subunit

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5242584..5444186 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040647566.2 → XP_040503500.1  voltage-dependent T-type calcium channel subunit alpha-1H isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z855
      Related
      ENSGALP00010024637.1, ENSGALT00010042076.1

    2. XM_015294424.4 → XP_015149910.3  voltage-dependent T-type calcium channel subunit alpha-1H isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z849, A0A8V0Z855
      Related
      ENSGALP00010024632.1, ENSGALT00010042069.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      5237660..5439856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046927922.1 → XP_046783878.1  voltage-dependent T-type calcium channel subunit alpha-1H isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z855

    2. XM_040683438.2 → XP_040539372.1  voltage-dependent T-type calcium channel subunit alpha-1H isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z855

    3. XM_040683437.2 → XP_040539371.1  voltage-dependent T-type calcium channel subunit alpha-1H isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z855
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials