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    USP6NL USP6 N-terminal like [ Gallus gallus (chicken) ]

    Gene ID: 419104, updated on 3-Dec-2024

    Summary

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    Symbol
    USP6NLprovided by CGNC
    Full Name
    USP6 N-terminal likeprovided by CGNC
    Primary source
    CGNC:50919
    See related
    Ensembl:ENSGALG00010005651
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See USP6NL in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (6621627..6732265, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (6739285..6850046, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene microRNA 1626 Neighboring gene CUGBP Elav-like family member 2 Neighboring gene microRNA 1596 Neighboring gene uncharacterized LOC121107961 Neighboring gene enoyl-CoA hydratase domain containing 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    USP6 N-terminal-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030840.3 → NP_001026011.3  USP6 N-terminal-like protein

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000011
      UniProtKB/TrEMBL
      A0A8V0XMV9
      Related
      ENSGALP00010008031.1, ENSGALT00010013537.1
      Conserved Domains (1) summary
      smart00164
      Location:99 → 314
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6621627..6732265 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015296018.4 → XP_015151504.1  USP6 N-terminal-like protein isoform X8

      UniProtKB/TrEMBL
      A0A8V0XMV9
      Related
      ENSGALP00010008029.1, ENSGALT00010013533.1
      Conserved Domains (1) summary
      smart00164
      Location:99 → 314
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    2. XM_040700781.2 → XP_040556715.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9
      Conserved Domains (1) summary
      smart00164
      Location:99 → 314
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    3. XM_046942463.1 → XP_046798419.1  USP6 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8V0XMV9

    4. XM_040700779.2 → XP_040556713.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9
      Conserved Domains (1) summary
      smart00164
      Location:99 → 314
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    5. XM_046942485.1 → XP_046798441.1  USP6 N-terminal-like protein isoform X7

      UniProtKB/TrEMBL
      A0A8V0XMV9

    6. XM_046942465.1 → XP_046798421.1  USP6 N-terminal-like protein isoform X3

      UniProtKB/TrEMBL
      A0A8V0XMV9

    7. XM_046942484.1 → XP_046798440.1  USP6 N-terminal-like protein isoform X6

      UniProtKB/TrEMBL
      A0A8V0XMV9, A0A8V0XVG8
      Related
      ENSGALP00010008026.1, ENSGALT00010013528.1

    8. XM_046942457.1 → XP_046798413.1  USP6 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8V0XMV9

    9. XM_046942487.1 → XP_046798443.1  USP6 N-terminal-like protein isoform X8

      UniProtKB/TrEMBL
      A0A8V0XMV9

    10. XM_040700782.2 → XP_040556716.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9
      Conserved Domains (1) summary
      smart00164
      Location:99 → 314
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    11. XM_046942461.1 → XP_046798417.1  USP6 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8V0XMV9

    12. XM_046942470.1 → XP_046798426.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9

    13. XM_040700785.2 → XP_040556719.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9
      Conserved Domains (1) summary
      smart00164
      Location:99 → 314
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    14. XM_046942475.1 → XP_046798431.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9

    15. XM_040700765.2 → XP_040556699.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMV9
      Conserved Domains (1) summary
      smart00164
      Location:122 → 337
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    16. XM_025150811.3 → XP_025006579.1  USP6 N-terminal-like protein isoform X5

      UniProtKB/TrEMBL
      A0A8V0XMV9
      Conserved Domains (1) summary
      smart00164
      Location:136 → 351
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6739285..6850046 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046908456.1 → XP_046764412.1  USP6 N-terminal-like protein isoform X8

      UniProtKB/TrEMBL
      A0A8V0XMV9

    2. XM_046908449.1 → XP_046764405.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9

    3. XM_046908444.1 → XP_046764400.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9

    4. XM_046908455.1 → XP_046764411.1  USP6 N-terminal-like protein isoform X8

      UniProtKB/TrEMBL
      A0A8V0XMV9

    5. XM_046908445.1 → XP_046764401.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9

    6. XM_046908447.1 → XP_046764403.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9

    7. XM_046908446.1 → XP_046764402.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9

    8. XM_046908451.1 → XP_046764407.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9

    9. XM_046908450.1 → XP_046764406.1  USP6 N-terminal-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8V0XMV9

    10. XM_046908441.1 → XP_046764397.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V0XMV9

    11. XM_046908454.1 → XP_046764410.1  USP6 N-terminal-like protein isoform X7

      UniProtKB/TrEMBL
      A0A8V0XMV9

    12. XM_046908443.1 → XP_046764399.1  USP6 N-terminal-like protein isoform X3

      UniProtKB/TrEMBL
      A0A8V0XMV9

    13. XM_046908453.1 → XP_046764409.1  USP6 N-terminal-like protein isoform X6

      UniProtKB/TrEMBL
      A0A8V0XMV9

    14. XM_046908442.1 → XP_046764398.1  USP6 N-terminal-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8V0XMV9

    15. XM_046908452.1 → XP_046764408.1  USP6 N-terminal-like protein isoform X5

      UniProtKB/TrEMBL
      A0A8V0XMV9
    Nucleotide Protein Strain
    Heading Accession and Version

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