The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

   Range

   20049082..20419695

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_015283893.4 → XP_015139379.2  usherin isoform X1

   UniProtKB/TrEMBL

   A0A8V0Z240

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:3983 → 4073

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

2. XM_419417.8 → XP_419417.5  usherin isoform X2

   UniProtKB/TrEMBL

   A0A8V0YV93

   Related

   ENSGALP00010022671.1, ENSGALT00010039305.1

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:3983 → 4073

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

3. XM_040697423.2 → XP_040553357.1  usherin isoform X5

   UniProtKB/TrEMBL

   A0A8V0Z240

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:3983 → 4073

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

4. XM_040697421.2 → XP_040553355.1  usherin isoform X3

   UniProtKB/TrEMBL

   A0A8V0Z240

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:3869 → 3959

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

5. XM_040697422.2 → XP_040553356.1  usherin isoform X4

   UniProtKB/TrEMBL

   A0A8V0Z240

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:3833 → 3923

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

6. XM_015283894.4 → XP_015139380.2  usherin isoform X1

   UniProtKB/TrEMBL

   A0A8V0Z240

   Related

   ENSGALP00010022685.1, ENSGALT00010039326.1

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:3983 → 4073

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

7. XM_040697424.2 → XP_040553358.1  usherin isoform X6

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

8. XM_015283895.4 → XP_015139381.2  usherin isoform X7

   UniProtKB/TrEMBL

   A0A8V0YNW7

   Related

   ENSGALP00010022700.1, ENSGALT00010039344.1

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

RNA

1. XR_005858133.2 RNA Sequence

2. XR_005858135.2 RNA Sequence

3. XR_005858134.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

   Range

   19963343..20333852

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_040667286.2 → XP_040523220.1  usherin isoform X1

   UniProtKB/TrEMBL

   A0A8V0Z240

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

2. XM_040667289.2 → XP_040523223.1  usherin isoform X2

   UniProtKB/TrEMBL

   A0A8V0YV93

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

3. XM_040667292.2 → XP_040523226.1  usherin isoform X5

   UniProtKB/TrEMBL

   A0A8V0Z240

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

4. XM_040667290.2 → XP_040523224.1  usherin isoform X3

   UniProtKB/TrEMBL

   A0A8V0Z240

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

5. XM_040667291.2 → XP_040523225.1  usherin isoform X4

   UniProtKB/TrEMBL

   A0A8V0Z240

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

6. XM_040667287.2 → XP_040523221.1  usherin isoform X1

   UniProtKB/TrEMBL

   A0A8V0Z240

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

7. XM_040667293.2 → XP_040523227.1  usherin isoform X6

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

8. XM_040667294.2 → XP_040523228.1  usherin isoform X7

   UniProtKB/TrEMBL

   A0A8V0YNW7

   Conserved Domains (7) summary

   smart00060
   Location:1380 → 1461

   FN3; Fibronectin type 3 domain

   smart00180
   Location:760 → 805

   EGF_Lam; Laminin-type epidermal growth factor-like domai

   smart00560
   Location:158 → 296

   LamGL; LamG-like jellyroll fold domain

   cd00055
   Location:963 → 1013

   EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...

   cd00063
   Location:1255 → 1371

   FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

   cd00110
   Location:1729 → 1881

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   cl02806
   Location:329 → 529

   Laminin_N; Laminin N-terminal (Domain VI)

RNA

1. XR_005848187.2 RNA Sequence

2. XR_005848189.2 RNA Sequence

3. XR_005848188.2 RNA Sequence