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    RPS6KC1 ribosomal protein S6 kinase C1 [ Gallus gallus (chicken) ]

    Gene ID: 421362, updated on 3-Dec-2024

    Summary

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    Symbol
    RPS6KC1provided by CGNC
    Full Name
    ribosomal protein S6 kinase C1provided by CGNC
    Primary source
    CGNC:7442
    See related
    Ensembl:ENSGALG00010019130
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RPS6KC1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (21330326..21419411, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (21242921..21331985, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene prospero homeobox 1 Neighboring gene uncharacterized LOC112532213 Neighboring gene angel homolog 2 Neighboring gene vasohibin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribosomal protein S6 kinase delta-1
    Names
    ribosomal protein S6 kinase, 52kDa, polypeptide 1
    XP_004935379.2
    XP_004935381.2
    XP_015139377.2
    XP_025004737.2
    XP_040523118.1
    XP_040523119.1
    XP_040523120.1
    XP_040523121.1
    XP_046771164.1
    XP_046795603.1
    XP_046795604.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      21330326..21419411 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046939648.1 → XP_046795604.1  ribosomal protein S6 kinase delta-1 isoform X5

      UniProtKB/TrEMBL
      A0A8V0ZG77

    2. XM_046939647.1 → XP_046795603.1  ribosomal protein S6 kinase delta-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z8S5

    3. XM_025148969.3 → XP_025004737.2  ribosomal protein S6 kinase delta-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZAA9
      Conserved Domains (4) summary
      cd07287
      Location:11 → 128
      PX_RPK118_like; The phosphoinositide binding Phox Homology domain of RPK118-like proteins
      cd02677
      Location:258 → 331
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cd05576
      Location:858 → 1037
      STKc_RPK118_like; Catalytic domain of the Serine/Threonine Kinase, RPK118, and similar proteins
      cl21453
      Location:339 → 411
      PKc_like; Protein Kinases, catalytic domain

    4. XM_004935324.5 → XP_004935381.2  ribosomal protein S6 kinase delta-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZAA9, A0A8V0ZGA7
      Related
      ENSGALP00010027599.1, ENSGALT00010046337.1
      Conserved Domains (3) summary
      cd07287
      Location:11 → 128
      PX_RPK118_like; The phosphoinositide binding Phox Homology domain of RPK118-like proteins
      cd02677
      Location:258 → 331
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cl21453
      Location:889 → 1038
      PKc_like; Protein Kinases, catalytic domain

    5. XM_004935322.5 → XP_004935379.2  ribosomal protein S6 kinase delta-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z9H6, A0A8V0ZAA9
      Related
      ENSGALP00010027592.1, ENSGALT00010046326.1
      Conserved Domains (4) summary
      cd07287
      Location:11 → 128
      PX_RPK118_like; The phosphoinositide binding Phox Homology domain of RPK118-like proteins
      cd02677
      Location:258 → 331
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cd05576
      Location:889 → 1068
      STKc_RPK118_like; Catalytic domain of the Serine/Threonine Kinase, RPK118, and similar proteins
      cl21453
      Location:356 → 442
      PKc_like; Protein Kinases, catalytic domain

    6. XM_015283891.4 → XP_015139377.2  ribosomal protein S6 kinase delta-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z8S5
      Related
      ENSGALP00010027569.1, ENSGALT00010046289.1
      Conserved Domains (4) summary
      cd02677
      Location:224 → 297
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cd05576
      Location:855 → 1034
      STKc_RPK118_like; Catalytic domain of the Serine/Threonine Kinase, RPK118, and similar proteins
      cl02563
      Location:13 → 94
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
      cl21453
      Location:322 → 408
      PKc_like; Protein Kinases, catalytic domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      21242921..21331985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046915208.1 → XP_046771164.1  ribosomal protein S6 kinase delta-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z8S5

    2. XM_040667186.2 → XP_040523120.1  ribosomal protein S6 kinase delta-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0ZAA9
      Conserved Domains (4) summary
      cd07287
      Location:11 → 128
      PX_RPK118_like; The phosphoinositide binding Phox Homology domain of RPK118-like proteins
      cd02677
      Location:258 → 331
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cd05576
      Location:858 → 1037
      STKc_RPK118_like; Catalytic domain of the Serine/Threonine Kinase, RPK118, and similar proteins
      cl21453
      Location:339 → 411
      PKc_like; Protein Kinases, catalytic domain

    3. XM_040667185.2 → XP_040523119.1  ribosomal protein S6 kinase delta-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZAA9
      Conserved Domains (3) summary
      cd07287
      Location:11 → 128
      PX_RPK118_like; The phosphoinositide binding Phox Homology domain of RPK118-like proteins
      cd02677
      Location:258 → 331
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cl21453
      Location:889 → 1038
      PKc_like; Protein Kinases, catalytic domain

    4. XM_040667184.2 → XP_040523118.1  ribosomal protein S6 kinase delta-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZAA9
      Conserved Domains (4) summary
      cd07287
      Location:11 → 128
      PX_RPK118_like; The phosphoinositide binding Phox Homology domain of RPK118-like proteins
      cd02677
      Location:258 → 331
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cd05576
      Location:889 → 1068
      STKc_RPK118_like; Catalytic domain of the Serine/Threonine Kinase, RPK118, and similar proteins
      cl21453
      Location:356 → 442
      PKc_like; Protein Kinases, catalytic domain

    5. XM_040667187.2 → XP_040523121.1  ribosomal protein S6 kinase delta-1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z8S5
      Conserved Domains (4) summary
      cd02677
      Location:224 → 297
      MIT_SNX15; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in sorting nexin 15 and related proteins. The molecular function of the MIT domain is unclear.
      cd05576
      Location:855 → 1034
      STKc_RPK118_like; Catalytic domain of the Serine/Threonine Kinase, RPK118, and similar proteins
      cl02563
      Location:13 → 94
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
      cl21453
      Location:322 → 408
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein Strain
    Heading Accession and Version

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