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    SEPTIN4 septin 4 [ Gallus gallus (chicken) ]

    Gene ID: 770762, updated on 3-Dec-2024

    Summary

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    Official Symbol
    SEPTIN4provided by CGNC
    Official Full Name
    septin 4provided by CGNC
    Primary source
    CGNC:56261
    See related
    Ensembl:ENSGALG00010029585
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SEPT4
    Orthologs
    human mouse all
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    Genomic context

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    See SEPTIN4 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (1309847..1323625)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (1039671..1053451)

    Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene elastin Neighboring gene uncharacterized LOC124417305 Neighboring gene LIM domain kinase 1 Neighboring gene coiled-coil domain containing 183 Neighboring gene SBDS ribosome maturation factor Neighboring gene tRNA-yW synthesizing protein 1 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoskeleton-dependent cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell division site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of septin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in septin ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    septin-4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1309847..1323625
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040650190.1 → XP_040506124.1  septin-4 isoform X1

      Conserved Domains (1) summary
      cd01850
      Location:561 → 835
      CDC_Septin; CDC/Septin GTPase family

    2. XM_004946419.3 → XP_004946476.2  septin-4 isoform X4

      Conserved Domains (1) summary
      cd01850
      Location:521 → 795
      CDC_Septin; CDC/Septin GTPase family

    3. XM_040650191.1 → XP_040506125.1  septin-4 isoform X2

      Conserved Domains (1) summary
      cd01850
      Location:546 → 820
      CDC_Septin; CDC/Septin GTPase family

    4. XM_040650193.1 → XP_040506127.1  septin-4 isoform X5

      Conserved Domains (1) summary
      cd01850
      Location:506 → 780
      CDC_Septin; CDC/Septin GTPase family

    5. XM_040650192.1 → XP_040506126.1  septin-4 isoform X3

      Conserved Domains (1) summary
      cd01850
      Location:528 → 802
      CDC_Septin; CDC/Septin GTPase family

    6. XM_040650194.1 → XP_040506128.1  septin-4 isoform X6

      Conserved Domains (1) summary
      cd01850
      Location:488 → 762
      CDC_Septin; CDC/Septin GTPase family

    7. XM_004946423.5 → XP_004946480.2  septin-4 isoform X9

      UniProtKB/TrEMBL
      A0A8V1AKZ9, A0A8V1AMU0
      Related
      ENSGALP00010044209.1, ENSGALT00010071519.1
      Conserved Domains (1) summary
      cd01850
      Location:121 → 395
      CDC_Septin; CDC/Septin GTPase family

    8. XM_015295936.4 → XP_015151422.3  septin-4 isoform X7

      UniProtKB/TrEMBL
      A0A8V1AMU0

    9. XM_001234087.7 → XP_001234088.5  septin-4 isoform X8

      UniProtKB/TrEMBL
      A0A8V1AMU0
      Related
      ENSGALP00010044208.1, ENSGALT00010071518.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1039671..1053451
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040687593.1 → XP_040543527.1  septin-4 isoform X1

      Conserved Domains (1) summary
      cd01850
      Location:561 → 835
      CDC_Septin; CDC/Septin GTPase family

    2. XM_040687597.1 → XP_040543531.1  septin-4 isoform X4

      Conserved Domains (1) summary
      cd01850
      Location:521 → 795
      CDC_Septin; CDC/Septin GTPase family

    3. XM_040687594.1 → XP_040543528.1  septin-4 isoform X2

      Conserved Domains (1) summary
      cd01850
      Location:546 → 820
      CDC_Septin; CDC/Septin GTPase family

    4. XM_040687598.1 → XP_040543532.1  septin-4 isoform X5

      Conserved Domains (1) summary
      cd01850
      Location:506 → 780
      CDC_Septin; CDC/Septin GTPase family

    5. XM_040687596.1 → XP_040543530.1  septin-4 isoform X3

      Conserved Domains (1) summary
      cd01850
      Location:528 → 802
      CDC_Septin; CDC/Septin GTPase family

    6. XM_040687599.1 → XP_040543533.1  septin-4 isoform X6

      Conserved Domains (1) summary
      cd01850
      Location:488 → 762
      CDC_Septin; CDC/Septin GTPase family

    7. XM_040687602.2 → XP_040543536.1  septin-4 isoform X9

      UniProtKB/TrEMBL
      A0A8V1AMU0
      Conserved Domains (1) summary
      cd01850
      Location:121 → 395
      CDC_Septin; CDC/Septin GTPase family

    8. XM_040687600.2 → XP_040543534.2  septin-4 isoform X7

      UniProtKB/TrEMBL
      A0A8V1AMU0

    9. XM_040687601.2 → XP_040543535.2  septin-4 isoform X8

      UniProtKB/TrEMBL
      A0A8V1AMU0
    Nucleotide Protein
    Heading Accession and Version

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