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    LUC7L2 LUC7 like 2, pre-mRNA splicing factor [ Gallus gallus (chicken) ]

    Gene ID: 417971, updated on 17-Aug-2024

    Summary

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    Symbol
    LUC7L2provided by CGNC
    Full Name
    LUC7 like 2, pre-mRNA splicing factorprovided by CGNC
    Primary source
    CGNC:8987
    See related
    Ensembl:ENSGALG00010010947
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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    Genomic context

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    See LUC7L2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (49159918..49191177)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (49457779..49489047)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene formation of mitochondrial complex V assembly factor 1 homolog Neighboring gene globin E Neighboring gene heat shock 70 kDa protein 12A-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splice site recognition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2-type prespliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LUC7 like 2, pre-mRNA splicing factor
    Names
    LUC7-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030755.2 → NP_001025926.1  LUC7 like 2, pre-mRNA splicing factor

      See identical proteins and their annotated locations for NP_001025926.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000012
      UniProtKB/TrEMBL
      F1NK51, Q5ZLW7
      Related
      ENSGALP00010014842.1, ENSGALT00010026218.1
      Conserved Domains (1) summary
      pfam03194
      Location:5 → 241
      LUC7; LUC7 N_terminus

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      49159918..49191177
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040696384.2 → XP_040552318.1  LUC7 like 2, pre-mRNA splicing factor isoform X1

      Conserved Domains (1) summary
      pfam03194
      Location:1 → 188
      LUC7; LUC7 N_terminus

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      49457779..49489047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907417.1 → XP_046763373.1  LUC7 like 2, pre-mRNA splicing factor isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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