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    CACNA1I calcium voltage-gated channel subunit alpha1 I [ Gallus gallus (chicken) ]

    Gene ID: 427900, updated on 3-Dec-2024

    Summary

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    Symbol
    CACNA1Iprovided by CGNC
    Full Name
    calcium voltage-gated channel subunit alpha1 Iprovided by CGNC
    Primary source
    CGNC:9194
    See related
    Ensembl:ENSGALG00010012410
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CACNA1I in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (50448711..50607155, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (50745386..50904632, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene GRB2-related adaptor protein 2 Neighboring gene uncharacterized LOC107053692 Neighboring gene uncharacterized LOC121109331 Neighboring gene microRNA mir-12209 Neighboring gene uncharacterized LOC107053688 Neighboring gene ribosomal protein S19 binding protein 1 Neighboring gene activating transcription factor 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression pattern of T-type Ca(2+) channels in embryonic chick nodose ganglion neurons. Pachuau J, et al. Dev Neurobiol, 2007 Dec. PMID 17874458
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A distinct pattern of T-type Ca(2+) channel functional expression in placode-derived neurons
      Title: Expression pattern of T-type Ca(2+) channels in embryonic chick nodose ganglion neurons.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables low voltage-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated sodium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion import IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in membrane depolarization during action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuronal action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated calcium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated sodium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    voltage-dependent T-type calcium channel subunit alpha-1I
    Names
    calcium channel, voltage-dependent, T type, alpha 1I subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      50448711..50607155 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040669161.2 → XP_040525095.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X2

      UniProtKB/TrEMBL
      A0A8V0YIL4
      Conserved Domains (1) summary
      pfam00520
      Location:610 → 837
      Ion_trans; Ion transport protein

    2. XM_040669160.2 → XP_040525094.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X2

      UniProtKB/TrEMBL
      A0A8V0YIL4
      Conserved Domains (1) summary
      pfam00520
      Location:610 → 837
      Ion_trans; Ion transport protein

    3. XM_040669159.2 → XP_040525093.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X2

      UniProtKB/TrEMBL
      A0A8V0YIL4
      Conserved Domains (1) summary
      pfam00520
      Location:610 → 837
      Ion_trans; Ion transport protein

    4. XM_046907892.1 → XP_046763848.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X1

      UniProtKB/TrEMBL
      A0A8V0YIL4
      Related
      ENSGALP00010017647.1, ENSGALT00010030427.1

    5. XM_040669164.2 → XP_040525098.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X3

      UniProtKB/TrEMBL
      A0A8V0YIL9
      Conserved Domains (1) summary
      PHA03307
      Location:1389 → 1744
      PHA03307; transcriptional regulator ICP4; Provisional

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      50745386..50904632 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040660622.2 → XP_040516556.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X5

      UniProtKB/TrEMBL
      A0A8V0YIL4
      Conserved Domains (1) summary
      pfam00520
      Location:610 → 837
      Ion_trans; Ion transport protein

    2. XM_040660621.2 → XP_040516555.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X5

      UniProtKB/TrEMBL
      A0A8V0YIL4
      Conserved Domains (1) summary
      pfam00520
      Location:610 → 837
      Ion_trans; Ion transport protein

    3. XM_046910051.1 → XP_046766007.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X5

      UniProtKB/TrEMBL
      A0A8V0YIL4

    4. XM_046910050.1 → XP_046766006.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X4

      UniProtKB/TrEMBL
      A0A8V0YIL4

    5. XM_040660625.2 → XP_040516559.1  voltage-dependent T-type calcium channel subunit alpha-1I isoform X6

      UniProtKB/TrEMBL
      A0A8V0YIL9
      Conserved Domains (1) summary
      PHA03307
      Location:1389 → 1744
      PHA03307; transcriptional regulator ICP4; Provisional
    Nucleotide Protein
    Heading Accession and Version

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