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    HEATR1 HEAT repeat containing 1 [ Gallus gallus (chicken) ]

    Gene ID: 425734, updated on 17-Aug-2024

    Summary

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    Symbol
    HEATR1provided by CGNC
    Full Name
    HEAT repeat containing 1provided by CGNC
    Primary source
    CGNC:52557
    See related
    Ensembl:ENSGALG00010009130
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See HEATR1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    45
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (37376146..37410544)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (37280345..37314720)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene 5-methyltetrahydrofolate-homocysteine methyltransferase Neighboring gene uncharacterized LOC121110429 Neighboring gene actinin alpha 2 Neighboring gene galectin 8 Neighboring gene EDAR associated death domain Neighboring gene endoplasmic reticulum oxidoreductase 1 beta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables snoRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase I IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of 90S preribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of t-UTP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    HEAT repeat-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      37376146..37410544
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040698263.2 → XP_040554197.1  HEAT repeat-containing protein 1

      UniProtKB/TrEMBL
      A0A8V0Y2A0
      Related
      ENSGALP00010012455.1, ENSGALT00010021781.1
      Conserved Domains (2) summary
      smart01036
      Location:1873 → 2026
      BP28CT; BP28CT (NUC211) domain
      sd00044
      Location:441 → 470
      HEAT; HEAT repeat [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      37280345..37314720
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040668498.2 → XP_040524432.1  HEAT repeat-containing protein 1

      UniProtKB/TrEMBL
      A0A8V0Y2A0
      Conserved Domains (2) summary
      smart01036
      Location:1873 → 2026
      BP28CT; BP28CT (NUC211) domain
      sd00044
      Location:441 → 470
      HEAT; HEAT repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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