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    ZSWIM6 zinc finger SWIM-type containing 6 [ Gallus gallus (chicken) ]

    Gene ID: 770670, updated on 3-Dec-2024

    Summary

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    Symbol
    ZSWIM6provided by CGNC
    Full Name
    zinc finger SWIM-type containing 6provided by CGNC
    Primary source
    CGNC:56197
    See related
    Ensembl:ENSGALG00010012722
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ZSWIM6 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (19645617..19757342)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (19645617..19757342)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene ERCC excision repair 8, CSA ubiquitin ligase complex subunit Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 2 Neighboring gene small integral membrane protein 15 Neighboring gene uncharacterized LOC121108268 Neighboring gene kinesin heavy chain member 2A Neighboring gene DIM1 dimethyladenosine transferase 1 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Cul2-RING ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger SWIM domain-containing protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      19645617..19757342
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001234009.7 → XP_001234010.2  zinc finger SWIM domain-containing protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y5C4, F1NAZ8
      Related
      ENSGALP00010017662.1, ENSGALT00010030449.1

    2. XM_004937262.5 → XP_004937319.1  zinc finger SWIM domain-containing protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A1D5PX77

    3. XM_040656058.2 → XP_040511992.1  zinc finger SWIM domain-containing protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A182C5V4, A0A8V0Y5C4

    4. XM_046905801.1 → XP_046761757.1  zinc finger SWIM domain-containing protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A182C5V4, A0A8V0Y5C4

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      19645617..19757342
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046936402.1 → XP_046792358.1  zinc finger SWIM domain-containing protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y5C4, F1NAZ8

    2. XM_046936403.1 → XP_046792359.1  zinc finger SWIM domain-containing protein 6 isoform X2

    3. XM_046936404.1 → XP_046792360.1  zinc finger SWIM domain-containing protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A182C5V4, A0A8V0Y5C4

    4. XM_046936405.1 → XP_046792361.1  zinc finger SWIM domain-containing protein 6 isoform X3

      UniProtKB/TrEMBL
      A0A182C5V4, A0A8V0Y5C4
    Nucleotide Protein
    Heading Accession and Version

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