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    DDO D-aspartate oxidase [ Gallus gallus (chicken) ]

    Gene ID: 770953, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DDOprovided by CGNC
    Official Full Name
    D-aspartate oxidaseprovided by CGNC
    Primary source
    CGNC:11198
    See related
    Ensembl:ENSGALG00010013930
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See DDO in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (66249852..66256629)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (66030628..66037403)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110445 Neighboring gene cyclin dependent kinase 19 Neighboring gene solute carrier family 22 member 16 Neighboring gene methyltransferase like 24 Neighboring gene cell division cycle 40 Neighboring gene WAS protein family member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables D-amino-acid oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in D-amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    D-aspartate oxidase
    XP_015140058.2
    XP_015140059.2
    XP_015140061.2
    XP_040524511.1
    XP_040524512.1
    XP_040524513.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      66249852..66256629
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015284573.4 → XP_015140059.2  D-aspartate oxidase

      UniProtKB/TrEMBL
      A0A8V0YNY8, A0A8V0YTZ7
      Conserved Domains (1) summary
      COG0665
      Location:5 → 327
      DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]

    2. XM_015284572.4 → XP_015140058.2  D-aspartate oxidase

      UniProtKB/TrEMBL
      A0A8V0YNY8, A0A8V0YTZ7
      Conserved Domains (1) summary
      COG0665
      Location:5 → 327
      DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]

    3. XM_015284575.4 → XP_015140061.2  D-aspartate oxidase

      UniProtKB/TrEMBL
      A0A8V0YNY8, A0A8V0YTZ7
      Related
      ENSGALP00010019696.1, ENSGALT00010033389.1
      Conserved Domains (1) summary
      COG0665
      Location:5 → 327
      DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      66030628..66037403
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040668578.2 → XP_040524512.1  D-aspartate oxidase

      UniProtKB/TrEMBL
      A0A8V0YNY8
      Conserved Domains (1) summary
      pfam01266
      Location:5 → 325
      DAO; FAD dependent oxidoreductase

    2. XM_040668577.2 → XP_040524511.1  D-aspartate oxidase

      UniProtKB/TrEMBL
      A0A8V0YNY8
      Conserved Domains (1) summary
      pfam01266
      Location:5 → 325
      DAO; FAD dependent oxidoreductase

    3. XM_040668579.2 → XP_040524513.1  D-aspartate oxidase

      UniProtKB/TrEMBL
      A0A8V0YNY8
      Conserved Domains (1) summary
      pfam01266
      Location:5 → 325
      DAO; FAD dependent oxidoreductase
    Nucleotide Protein
    Heading Accession and Version

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