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    WDR19 WD repeat domain 19 [ Gallus gallus (chicken) ]

    Gene ID: 430829, updated on 17-Aug-2024

    Summary

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    Symbol
    WDR19provided by CGNC
    Full Name
    WD repeat domain 19provided by CGNC
    Primary source
    CGNC:10496
    See related
    Ensembl:ENSGALG00010013532
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See WDR19 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (68868227..68907782, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (68853829..68893152, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L9 Neighboring gene klotho beta Neighboring gene replication factor C subunit 1 Neighboring gene kelch like family member 5 Neighboring gene transmembrane protein 156

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intraciliary retrograde transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of intraciliary transport particle A IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing protein 19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      68868227..68907782 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015285660.4 → XP_015141146.3  WD repeat-containing protein 19 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YSX7
      Related
      ENSGALP00010019302.1, ENSGALT00010032581.1
      Conserved Domains (4) summary
      COG2319
      Location:28 → 338
      WD40; WD40 repeat [General function prediction only]
      sd00006
      Location:779 → 807
      TPR; TPR repeat [structural motif]
      sd00039
      Location:15 → 74
      7WD40; WD40 repeat [structural motif]
      cl26078
      Location:913 → 966
      Clathrin; Region in Clathrin and VPS

    2. XM_040699816.1 → XP_040555750.1  WD repeat-containing protein 19 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YKF3
      Related
      ENSGALP00010019292.1, ENSGALT00010032567.1
      Conserved Domains (3) summary
      sd00039
      Location:72 → 110
      7WD40; WD40 repeat [structural motif]
      cl26078
      Location:753 → 806
      Clathrin; Region in Clathrin and VPS
      cl29593
      Location:49 → 177
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_040699817.1 → XP_040555751.1  WD repeat-containing protein 19 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YKF3
      Conserved Domains (3) summary
      COG2319
      Location:26 → 401
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:49 → 87
      7WD40; WD40 repeat [structural motif]
      cl26078
      Location:730 → 783
      Clathrin; Region in Clathrin and VPS

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      68853829..68893152 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040671136.2 → XP_040527070.1  WD repeat-containing protein 19 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YSX7
      Conserved Domains (4) summary
      COG2319
      Location:28 → 338
      WD40; WD40 repeat [General function prediction only]
      sd00006
      Location:779 → 807
      TPR; TPR repeat [structural motif]
      sd00039
      Location:15 → 74
      7WD40; WD40 repeat [structural motif]
      cl26078
      Location:913 → 966
      Clathrin; Region in Clathrin and VPS

    2. XM_040671137.1 → XP_040527071.1  WD repeat-containing protein 19 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YKF3
      Conserved Domains (3) summary
      sd00039
      Location:72 → 110
      7WD40; WD40 repeat [structural motif]
      cl26078
      Location:753 → 806
      Clathrin; Region in Clathrin and VPS
      cl29593
      Location:49 → 177
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    3. XM_040671138.1 → XP_040527072.1  WD repeat-containing protein 19 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YKF3
      Conserved Domains (3) summary
      COG2319
      Location:26 → 401
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:49 → 87
      7WD40; WD40 repeat [structural motif]
      cl26078
      Location:730 → 783
      Clathrin; Region in Clathrin and VPS
    Nucleotide Protein
    Heading Accession and Version

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