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    gldi-5 Chondroitin proteoglycan 4 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175480, updated on 17-Oct-2024

    Summary

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    Official Symbol
    gldi-5
    Official Full Name
    Chondroitin proteoglycan 4 domain-containing protein
    Primary source
    WormBase:WBGene00007580
    Locus tag
    CELE_C14B1.9
    See related
    AllianceGenome:WB:WBGene00007580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See gldi-5 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (3725075..3726500, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Spliceosome-associated protein CWC15 homolog Neighboring gene CPSF_A domain-containing protein Neighboring gene Cell division control protein 45 homolog Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A global analysis of genetic interactions in Caenorhabditis elegans. Byrne AB, et al. J Biol, 2007. PMID 17897480, Free PMC Article
    2. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Chondroitin proteoglycan 4 domain-containing protein
    NP_001411902.1
    • Confirmed by transcript evidence
    NP_497755.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      3725075..3726500 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001424979.1 → NP_001411902.1  Chondroitin proteoglycan 4 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

    2. NM_065354.6 → NP_497755.2  Chondroitin proteoglycan 4 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497755.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17966
      Conserved Domains (1) summary
      pfam15481
      Location:59 → 150
      CPG4; Chondroitin proteoglycan 4
    Nucleotide Protein
    Heading Accession and Version

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