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    C27D8.4 NAD-dependent epimerase/dehydratase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178223, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C27D8.4
    Official Full Name
    NAD-dependent epimerase/dehydratase domain-containing protein
    Primary source
    WormBase:WBGene00007780
    Locus tag
    CELE_C27D8.4
    See related
    AllianceGenome:WB:WBGene00007780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable oxidoreductase activity. Predicted to be located in membrane. Is expressed in intestine and pharynx. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C27D8.4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    6
    Sequence:
    Chromosome: IV; NC_003282.8 (12704111..12706758)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene PRotein arginine MethylTransferase Neighboring gene C3H1-type domain-containing protein;Coiled-coil domain-containing protein Neighboring gene ncRNA Neighboring gene Integrase catalytic domain-containing protein;RING-type domain-containing protein Neighboring gene BACK domain-containing protein Neighboring gene Protein kinase domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    NAD-dependent epimerase/dehydratase domain-containing protein
    NP_502425.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12704111..12706758
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070024.8 → NP_502425.2  NAD-dependent epimerase/dehydratase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502425.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q93291
      Conserved Domains (1) summary
      cl21454
      Location:80 → 313
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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