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    clc-9 CLaudin-like in Caenorhabditis [ Caenorhabditis elegans ]

    Gene ID: 188130, updated on 9-Dec-2024

    Summary

    Official Symbol
    clc-9
    Official Full Name
    CLaudin-like in Caenorhabditis
    Primary source
    WormBase:WBGene00011479
    Locus tag
    CELE_T05E11.2
    See related
    AllianceGenome:WB:WBGene00011479
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See clc-9 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    6
    Sequence:
    Chromosome: IV; NC_003282.8 (11112941..11116755)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Small ribosomal subunit protein uS7 Neighboring gene ncRNA Neighboring gene Intramembrane protease 2 Neighboring gene Endoplasmin homolog Neighboring gene DNA topoisomerase (ATP-hydrolyzing);Meiotic recombination protein spo-11 Neighboring gene SWI/SNF chromatin remodeling complex core catalytic subunit swsn-4

    General gene information

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane  
    is_active_in plasma membrane  

    General protein information

    Preferred Names
    CLaudin-like in Caenorhabditis
    NP_001129867.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class clc
    NP_502078.3
    • Confirmed by transcript evidence;
      Product from WormBase gene class clc

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      11112941..11116755
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001136395.2NP_001129867.1  CLaudin-like in Caenorhabditis [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001129867.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3GWC2
    2. NM_069677.4NP_502078.3  CLaudin-like in Caenorhabditis [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502078.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22234
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