U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tm7sf2 transmembrane 7 superfamily member 2 [ Mus musculus (house mouse) ]

    Gene ID: 73166, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tm7sf2provided by MGI
    Official Full Name
    transmembrane 7 superfamily member 2provided by MGI
    Primary source
    MGI:MGI:1920416
    See related
    Ensembl:ENSMUSG00000024799 AllianceGenome:MGI:1920416
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ANG1; C14SR; Dhcr14; 3110041O18Rik
    Summary
    Enables delta14-sterol reductase activity. Involved in cholesterol biosynthetic process. Located in organelle membrane. Is expressed in several structures, including adrenal gland; alimentary system; eye; liver; and nervous system. Orthologous to human TM7SF2 (transmembrane 7 superfamily member 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in liver adult (RPKM 170.8), liver E18 (RPKM 41.3) and 23 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tm7sf2 in Genome Data Viewer
    Location:
    19 A; 19 4.34 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (6112851..6117880, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (6062821..6067850, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_45418 Neighboring gene FAU ubiquitin like and ribosomal protein S30 fusion Neighboring gene zinc finger, HIT domain containing 2 Neighboring gene VPS51 GARP complex subunit Neighboring gene CapStarr-seq enhancer MGSCv37_chr19:6077181-6077364 Neighboring gene transmembrane protein 262 Neighboring gene zinc finger like protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E3238 Neighboring gene STARR-positive B cell enhancer ABC_E4262 Neighboring gene cell division cycle associated 5

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables NADP binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables delta14-sterol reductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables delta14-sterol reductase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables delta14-sterol reductase activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in cholesterol biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cholesterol biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cholesterol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cholesterol biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nuclear inner membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in organelle membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of receptor complex ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    General protein information

    Preferred Names
    delta(14)-sterol reductase TM7SF2
    Names
    3-beta-hydroxysterol Delta (14)-reductase
    C-14 sterol reductase
    delta-14-SR
    sterol C14-reductase
    NP_082730.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028454.2NP_082730.2  delta(14)-sterol reductase TM7SF2

      See identical proteins and their annotated locations for NP_082730.2

      Status: VALIDATED

      Source sequence(s)
      AF480070, AI846153, AK040016, BY551700
      Consensus CDS
      CCDS29490.2
      UniProtKB/Swiss-Prot
      B5LBK0, Q71KT5
      UniProtKB/TrEMBL
      E0CX74
      Related
      ENSMUSP00000025713.6, ENSMUST00000025713.12
      Conserved Domains (1) summary
      cl21511
      Location:8418
      PEMT; Phospholipid methyltransferase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      6112851..6117880 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)