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    Y24D9B.1 RNase NYN domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177197, updated on 9-Dec-2024

    Summary

    Official Symbol
    Y24D9B.1
    Official Full Name
    RNase NYN domain-containing protein
    Primary source
    WormBase:WBGene00021287
    Locus tag
    CELE_Y24D9B.1
    See related
    AllianceGenome:WB:WBGene00021287
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA endonuclease activity and mRNA binding activity. Predicted to be active in cytoplasmic ribonucleoprotein granule and nucleus. Orthologous to human KHNYN (KH and NYN domain containing); N4BP1 (NEDD4 binding protein 1); and NYNRIN (NYN domain and retroviral integrase containing). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Y24D9B.1 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    6
    Sequence:
    Chromosome: IV; NC_003282.8 (4317358..4321921)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Histone-lysine N-methyltransferase set-9 Neighboring gene ncRNA Neighboring gene ncRNA

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA endonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasmic ribonucleoprotein granule IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    RNase NYN domain-containing protein
    NP_500540.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      4317358..4321921
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068139.5NP_500540.2  RNase NYN domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500540.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TYQ2
      Conserved Domains (1) summary
      pfam11977
      Location:37189
      RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain