Tsbp1 testis expressed basic protein 1 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Tsbp1provided by MGI
Official Full Name: testis expressed basic protein 1provided by MGI
Primary source: MGI:MGI:3039565
See related: Ensembl:ENSMUSG00000057246 AllianceGenome:MGI:3039565
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: NG8; TSBP; Tesb; Tesbp
Summary: Is expressed in nervous system and sensory organ. Orthologous to human TSBP1 (testis expressed basic protein 1). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Restricted expression toward testis adult (RPKM 119.4) See more
Orthologs: human all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: 17 18.0 cM; 17 B1

Exon count:: 36

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	17	NC_000083.7 (34617749..34679708)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	17	NC_000083.6 (34398767..34460734)

Chromosome 17 - NC_000083.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Variation

Go to the top of the page Help

Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (2) 1 citation

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Markers

35.MMHAP28FRD11.seq (e-PCR)
- UniSTS:124138

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

Go to the top of the page Help

Preferred Names: testis-expressed basic protein 1

Names: testis specific basic protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001001177.2 → NP_001001177.2 testis-expressed basic protein 1 isoform 1

See identical proteins and their annotated locations for NP_001001177.2

Status: VALIDATED

Description

Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).

Source sequence(s)

AK077077, BY454825, CR974457, CT009767

Consensus CDS

CCDS37586.1

UniProtKB/TrEMBL

A2CG24, Q8BHP1

Related

ENSMUSP00000077685.6, ENSMUST00000078615.12
NM_001163855.1 → NP_001157327.1 testis-expressed basic protein 1 isoform 2

See identical proteins and their annotated locations for NP_001157327.1

Status: VALIDATED

Description

Transcript Variant: This variant (2) differs in the 5' UTR and in the central and 3' coding regions, compared to variant 1. The resulting isoform (2) has a distinct C-terminus and is shorter than isoform 1.

Source sequence(s)

BC051142, BY454825

Consensus CDS

CCDS50076.1

UniProtKB/TrEMBL

Q80XD0

Related

ENSMUSP00000109812.2, ENSMUST00000114175.8