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    Snord85 small nucleolar RNA, C/D box 85 [ Mus musculus (house mouse) ]

    Gene ID: 100217460, updated on 17-Aug-2024

    Summary

    Official Symbol
    Snord85provided by MGI
    Official Full Name
    small nucleolar RNA, C/D box 85provided by MGI
    Primary source
    MGI:MGI:3819558
    See related
    Ensembl:ENSMUSG00000065196 AllianceGenome:MGI:3819558
    Gene type
    snoRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Z50; MBII-251
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    Genomic context

    See Snord85 in Genome Data Viewer
    Location:
    4 D2.2; 4 63.5 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (130476949..130477013)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (130749638..130749702)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene Na+/K+ transporting ATPase interacting 1 Neighboring gene STARR-seq mESC enhancer starr_11526 Neighboring gene STARR-seq mESC enhancer starr_11530 Neighboring gene predicted gene, 53228 Neighboring gene STARR-seq mESC enhancer starr_11531 Neighboring gene STARR-seq mESC enhancer starr_11533 Neighboring gene pumilio RNA-binding family member 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:130330830-130331017 Neighboring gene predicted gene, 24091 Neighboring gene predicted gene, 23711

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_028565.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BX004791
      Related
      ENSMUST00000083262.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      130476949..130477013
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)