U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    arp2 ARP2/3 actin-organizing complex actin-related protein subunit Arp2 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 5802965, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    arp2
    Official Full Name
    ARP2/3 actin-organizing complex actin-related protein subunit Arp2
    Primary source
    PomBase:SPAC11H11.06
    Locus tag
    SPOM_SPAC11H11.06
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    SPAC22F8.01
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See arp2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (4783022..4784765)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene pheromone p-factor receptor Mam2 Neighboring gene protein Fta6 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Golgi 4,6-pyruvylated galactose (PvGal) residue biosynthesis protein Pvg5

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Mechanism of actin filament branch formation by Arp2/3 complex revealed by a high-resolution cryo-EM structureof the branch junction. Chou SZ, et al. Proc Natl Acad Sci U S A, 2022 Dec 6. PMID 36442092, Free PMC Article
    2. Homeostatic actin cytoskeleton networks are regulated by assembly factor competition for monomers. Burke TA, et al. Curr Biol, 2014 Mar 3. PMID 24560576, Free PMC Article
    3. Cryo-EM reveals the transition of Arp2/3 complex from inactive to nucleation-competent state. Shaaban M, et al. Nat Struct Mol Biol, 2020 Nov. PMID 32839613, Free PMC Article
    4. Force and phosphate release from Arp2/3 complex promote dissociation of actin filament branches. Pandit NG, et al. Proc Natl Acad Sci U S A, 2020 Jun 16. PMID 32461373, Free PMC Article
    5. Structural and biochemical characterization of two binding sites for nucleation-promoting factor WASp-VCA on Arp2/3 complex. Ti SC, et al. Proc Natl Acad Sci U S A, 2011 Aug 16. PMID 21676862, Free PMC Article

    See all (34) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Mechanism of actin filament branch formation by Arp2/3 complex revealed by a high-resolution cryo-EM structureof the branch junction.
      Title: Mechanism of actin filament branch formation by Arp2/3 complex revealed by a high-resolution cryo-EM structureof the branch junction.
    2. Cryo-EM reveals the transition of Arp2/3 complex from inactive to nucleation-competent state.
      Title: Cryo-EM reveals the transition of Arp2/3 complex from inactive to nucleation-competent state.
    3. Force and phosphate release from Arp2/3 complex promote dissociation of actin filament branches.
      Title: Force and phosphate release from Arp2/3 complex promote dissociation of actin filament branches.
    4. WASp-VCA binding to Arp2/3 protein complex causes a conformational change that favors binding to the side of an actin filament, which allows further changes required to nucleate a daughter filament.
      Title: Conformational changes in Arp2/3 complex induced by ATP, WASp-VCA, and actin filaments.
    5. Arp2/3 complex participates in regulating formin F-actin networks.
      Title: Homeostatic actin cytoskeleton networks are regulated by assembly factor competition for monomers.
    6. Insertions within the actin core of actin-related protein 3 (Arp3) modulate branching nucleation by Arp2/3 complex
      Title: Insertions within the actin core of actin-related protein 3 (Arp3) modulate branching nucleation by Arp2/3 complex.
    7. Cofilin rapidly dissociates Arp2/3 complex and branches by direct competition for binding sites on the actin filament and by propagation of structural changes in the actin filament that reduce affinity for Arp2/3 complex.
      Title: Cofilin dissociates Arp2/3 complex and branches from actin filaments.
    8. Truncation of the N terminus of ARPC5, the smallest subunit in the complex, increased the yield of Arp2Delta Arp2/3 complex during purification but did not compromise nucleation activity of the full Arp2/3 complex.
      Title: Structure and biochemical properties of fission yeast Arp2/3 complex lacking the Arp2 subunit.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables actin filament binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Arp2/3 complex-mediated actin nucleation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in Arp2/3 complex-mediated actin nucleation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in actin cortical patch assembly IC
    Inferred by Curator
    more info
    		  
    involved_in actin filament branching EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in endocytosis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Arp2/3 protein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Arp2/3 protein complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in actin cortical patch IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cell cortex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cell cortex of cell tip IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in medial cortex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ARP2/3 actin-organizing complex actin-related protein subunit Arp2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4783022..4784765
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001356181.2 → NP_001342919.1  ARP2/3 actin-organizing complex actin-related protein subunit Arp2 [Schizosaccharomyces pombe]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9US62, Q9UTP2, Q9UUJ1
      Conserved Domains (1) summary
      smart00268
      Location:4 → 382
      ACTIN; Actin
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials