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    shy1 cytochrome c oxidase assembly protein Shy1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540192, updated on 14-Nov-2024

    Summary

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    Official Symbol
    shy1
    Official Full Name
    cytochrome c oxidase assembly protein Shy1
    Primary source
    PomBase:SPBC1215.01
    Locus tag
    SPOM_SPBC1215.01
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See shy1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003423.3 (1505098..1509451)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene tRNA-Thr Neighboring gene 5S ribosomal RNA Neighboring gene ncRNA Neighboring gene NatB N-acetyltransferase complex regulatory subunit Naa25 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene UBA/EH/EF hand domain protein Ucp8 Neighboring gene 60S ribosomal protein eL43

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of Shy1, the Schizosaccharomyces pombe homolog of human SURF1. Luo Y, et al. Sci Rep, 2024 Sep 17. PMID 39289458, Free PMC Article
    2. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
    3. SR protein kinases promote splicing of nonconsensus introns. Lipp JJ, et al. Nat Struct Mol Biol, 2015 Aug. PMID 26167880
    4. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
    5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables unfolded protein binding ISO
    Inferred from Sequence Orthology
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial cytochrome c oxidase assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mitochondrial respirasome assembly EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in mitochondrial inner membrane EXP
    Inferred from Experiment
    more info
    		 PubMed 
    is_active_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome c oxidase assembly protein Shy1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      1505098..1509451
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021525.3 → NP_595631.1  cytochrome c oxidase assembly protein Shy1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595631.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9Y810
      Conserved Domains (1) summary
      COG3346
      Location:24 → 281
      Shy1; Cytochrome oxidase assembly protein ShyY1 [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

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