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    rfc5 DNA replication factor C complex subunit Rfc5 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540215, updated on 14-Nov-2024

    Summary

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    Official Symbol
    rfc5
    Official Full Name
    DNA replication factor C complex subunit Rfc5
    Primary source
    PomBase:SPBC83.14c
    Locus tag
    SPOM_SPBC83.14C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See rfc5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003423.3 (1534421..1536111, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene tricarboxylic acid transporter Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ribosome biogenesis protein wdr74 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Contrasting effects of Elg1-RFC and Ctf18-RFC inactivation in the absence of fully functional RFC in fission yeast. Kim J, et al. Nucleic Acids Res, 2005. PMID 16040599, Free PMC Article
    2. Fidelity of eucaryotic DNA polymerase delta holoenzyme from Schizosaccharomyces pombe. Chen X, et al. J Biol Chem, 2000 Jun 9. PMID 10748208
    3. In vitro reconstitution of the Schizosaccharomyces pombe alternative excision repair pathway. Alleva JL, et al. Biochemistry, 2000 Mar 14. PMID 10704216
    4. RFCCtf18 and the Swi1-Swi3 complex function in separate and redundant pathways required for the stabilization of replication forks to facilitate sister chromatid cohesion in Schizosaccharomyces pombe. Ansbach AB, et al. Mol Biol Cell, 2008 Feb. PMID 18045993, Free PMC Article
    5. The S. pombe translation initiation factor eIF4G is Sumoylated and associates with the SUMO protease Ulp2. Jongjitwimol J, et al. PLoS One, 2014. PMID 24818994, Free PMC Article

    See all (17) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP hydrolysis activity NAS
    Non-traceable Author Statement
    more info
    		  
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    contributes_to DNA clamp loader activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA clamp unloader activity IC
    Inferred by Curator
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in DNA strand elongation involved in mitotic DNA replication IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in DNA-templated DNA replication IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in UV-damage excision repair IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ctf18 RFC-like complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of DNA replication factor C complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Elg1 RFC-like complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Elg1 RFC-like complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of Rad17 RFC-like complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in chromatin IC
    Inferred by Curator
    more info
    		  
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    DNA replication factor C complex subunit Rfc5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      1534421..1536111 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021540.3 → NP_595646.1  DNA replication factor C complex subunit Rfc5 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595646.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94697
      Conserved Domains (3) summary
      cd00009
      Location:23 → 177
      AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
      PRK12402
      Location:1 → 340
      PRK12402; replication factor C small subunit 2; Reviewed
      pfam08542
      Location:253 → 340
      Rep_fac_C; Replication factor C C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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