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    otg3 alpha-1,3-galactosyltransferase Otg3 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540859, updated on 18-Sep-2024

    Summary

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    Official Symbol
    otg3
    Official Full Name
    alpha-1,3-galactosyltransferase Otg3
    Primary source
    PomBase:SPBC4C3.09
    Locus tag
    SPOM_SPBC4C3.09
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    gnt2
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    Genomic context

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    See otg3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (3118837..3120525, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene GTPase-activating protein Neighboring gene ncRNA Neighboring gene serine/threonine protein kinase Ppk21/Pdk1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene proteasome core particle subunit beta 1 Pre3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene alpha-1,3-galactosyltransferase Otg2 Neighboring gene translation initiation factor eIF3f

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Substrate specificities of α1,2- and α1,3-galactosyltransferases and characterization of Gmh1p and Otg1p in Schizosaccharomyces pombe. Fukunaga T, et al. Glycobiology, 2021 Sep 9. PMID 33909078
    2. Identification of novel α1,3-galactosyltransferase and elimination of α-galactose-containing glycans by disruption of multiple α-galactosyltransferase genes in Schizosaccharomyces pombe. Ohashi T, et al. J Biol Chem, 2012 Nov 9. PMID 22988247, Free PMC Article
    3. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article
    4. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables alpha-1,3-galactosyltransferase activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables alpha-1,3-galactosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glycosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in protein O-linked glycosylation EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    alpha-1,3-galactosyltransferase Otg3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      3118837..3120525 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022217.3 → NP_596296.1  alpha-1,3-galactosyltransferase Otg3 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596296.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O43062
      Conserved Domains (1) summary
      COG5597
      Location:37 → 376
      Gnt1; Alpha-N-acetylglucosamine transferase [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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