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    psd3 phosphatidylserine decarboxylase Psd3 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543178, updated on 18-Sep-2024

    Summary

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    Official Symbol
    psd3
    Official Full Name
    phosphatidylserine decarboxylase Psd3
    Primary source
    PomBase:SPAC31G5.15
    Locus tag
    SPOM_SPAC31G5.15
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See psd3 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    8
    Sequence:
    Chromosome: I; NC_003424.3 (3014288..3017900)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene 19S proteasome regulatory subunit, ubiquitin-specific protease subunit Rpn11 Neighboring gene ncRNA Neighboring gene glycine decarboxylase T subunit gcv1 Neighboring gene ncRNA Neighboring gene dolichyl-phosphate beta-D-mannosyltransferase catalytic subunit Dpm1 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phosphatidylethanolamine is required for normal cell morphology and cytokinesis in the fission yeast Schizosaccharomyces pombe. Luo J, et al. Eukaryot Cell, 2009 May. PMID 19286980, Free PMC Article
    2. Expanded Interactome of the Intrinsically Disordered Protein Dss1. Schenstrøm SM, et al. Cell Rep, 2018 Oct 23. PMID 30355493, Free PMC Article
    3. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
    4. A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response. Ptushkina M, et al. Sci Rep, 2017 Sep 21. PMID 28935859, Free PMC Article
    5. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Psd1, psd2, and psd3, encoding phosphatidylserine decarboxylases catalyze the phosphatidylserine to phosphatidylethanolamine.
      Title: Phosphatidylethanolamine is required for normal cell morphology and cytokinesis in the fission yeast Schizosaccharomyces pombe.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables phosphatidylserine decarboxylase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables phosphatidylserine decarboxylase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables phospholipid binding ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in phosphatidylcholine biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in phosphatidylethanolamine biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in phosphatidylethanolamine biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein autoprocessing IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    is_active_in Golgi stack IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cell division site HDA PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in endosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in fungal-type vacuole membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    phosphatidylserine decarboxylase Psd3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      3014288..3017900
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019442.3 → NP_594016.2  phosphatidylserine decarboxylase Psd3 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594016.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14111
      Conserved Domains (2) summary
      cd04039
      Location:267 → 374
      C2_PSD; C2 domain present in Phosphatidylserine decarboxylase (PSD)
      cl03656
      Location:656 → 952
      PS_Dcarbxylase; Phosphatidylserine decarboxylase
    Nucleotide Protein
    Heading Accession and Version

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