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    4933438B17Rik RIKEN cDNA 4933438B17 gene [ Mus musculus (house mouse) ]

    Gene ID: 71247, updated on 22-Oct-2024

    Summary

    Official Symbol
    4933438B17Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4933438B17 geneprovided by MGI
    Primary source
    MGI:MGI:1918497
    See related
    Ensembl:ENSMUSG00000105490 AllianceGenome:MGI:1918497
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 2.9) See more
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    Genomic context

    See 4933438B17Rik in Genome Data Viewer
    Location:
    5; 5 G1.2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (127107853..127165593)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (127030789..127088529)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700081B01 gene Neighboring gene predicted gene, 33347 Neighboring gene STARR-seq mESC enhancer starr_14397 Neighboring gene predicted gene, 40331 Neighboring gene STARR-seq mESC enhancer starr_14398 Neighboring gene predicted gene, 33491 Neighboring gene RIKEN cDNA 4930572K03 gene Neighboring gene RIKEN cDNA 4930548G05 gene Neighboring gene STARR-seq mESC enhancer starr_14399

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040685.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AK017106
      Related
      ENSMUST00000196336.3

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      127107853..127165593
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)