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    Fam124a family with sequence similarity 124, member A [ Mus musculus (house mouse) ]

    Gene ID: 629059, updated on 27-Nov-2024

    Summary

    Official Symbol
    Fam124aprovided by MGI
    Official Full Name
    family with sequence similarity 124, member Aprovided by MGI
    Primary source
    MGI:MGI:3645930
    See related
    Ensembl:ENSMUSG00000035184 AllianceGenome:MGI:3645930
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG629059
    Summary
    Orthologous to human FAM124A (family with sequence similarity 124 member A). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in CNS E18 (RPKM 13.2), whole brain E14.5 (RPKM 7.5) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Fam124a in Genome Data Viewer
    Location:
    14 D1; 14 33.23 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (62793186..62845935)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (62555737..62608486)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 24625 Neighboring gene small nuclear ribonucleoprotein N pseudogene Neighboring gene predicted gene, 23816 Neighboring gene serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 Neighboring gene predicted gene, 25162

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001243857.1NP_001230786.1  protein FAM124A

      Status: VALIDATED

      Source sequence(s)
      AC154516, AK137188, AW049618, BU921699
      Consensus CDS
      CCDS56963.1
      UniProtKB/TrEMBL
      D3Z5V4
      Related
      ENSMUSP00000047681.8, ENSMUST00000039064.8
      Conserved Domains (1) summary
      pfam15067
      Location:45276
      FAM124; FAM124 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      62793186..62845935
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036158777.1XP_036014670.1  protein FAM124A isoform X1

      Conserved Domains (1) summary
      pfam15067
      Location:16247
      FAM124; FAM124 family