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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_047195.1 RefSeqGene
- Range
-
4779..182917
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001321193.3 → NP_001308122.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2), as well as variants 1, 3, 5, 6, and 7, encodes isoform 1.
- Source sequence(s)
-
AC023235, AC078799, KF457713
- Consensus CDS
-
CCDS46961.1
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
- Related
- ENSP00000405574.1, ENST00000430069.5
- Conserved Domains (3) summary
-
- cd00200
Location:164 → 470
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:228 → 264
- 7WD40; WD40 repeat [structural motif]
- pfam08513
Location:7 → 31
- LisH
-
NM_001321194.3 → NP_001308123.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longer isoform (1). Variants 1, 2, 3, 5, 6, and 7 all encode the same isoform (1).
- Source sequence(s)
-
AC023235, AC078799, KF457713
- Consensus CDS
-
CCDS46961.1
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
- Related
- ENSP00000387849.3, ENST00000422442.6
- Conserved Domains (3) summary
-
- cd00200
Location:164 → 470
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:228 → 264
- 7WD40; WD40 repeat [structural motif]
- pfam08513
Location:7 → 31
- LisH
-
NM_001321195.3 → NP_001308124.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence compared to variant 3. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1. Variants 4 and 8 both encode the same isoform (2).
- Source sequence(s)
-
AC023235, AC078799, KF457713
- Consensus CDS
-
CCDS93428.1
- UniProtKB/TrEMBL
- B7Z475, C9JLJ1
- Conserved Domains (2) summary
-
- cd00200
Location:77 → 383
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:182 → 219
- 7WD40; WD40 repeat [structural motif]
-
NM_001374327.1 → NP_001361256.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5), as well as variants 1, 2, 3, 6, and 7, encodes isoform 1.
- Source sequence(s)
-
AC023235, AC078799, KF457713
- Consensus CDS
-
CCDS46961.1
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
- Related
- ENSP00000263964.11, ENST00000352800.10
- Conserved Domains (3) summary
-
- cd00200
Location:164 → 470
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:228 → 264
- 7WD40; WD40 repeat [structural motif]
- pfam08513
Location:7 → 31
- LisH
-
NM_001374328.1 → NP_001361257.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6), as well as variants 1, 2, 3, 5, and 7, encodes isoform 1.
- Source sequence(s)
-
AC023235, AC078799, KF457713
- Consensus CDS
-
CCDS46961.1
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
- Conserved Domains (3) summary
-
- cd00200
Location:164 → 470
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:228 → 264
- 7WD40; WD40 repeat [structural motif]
- pfam08513
Location:7 → 31
- LisH
-
NM_001374329.1 → NP_001361258.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), as well as variants 1, 2, 3, 5, and 6, encodes isoform 1.
- Source sequence(s)
-
AC023235, AC078799, KF457713
- Consensus CDS
-
CCDS46961.1
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
- Conserved Domains (3) summary
-
- cd00200
Location:164 → 470
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:228 → 264
- 7WD40; WD40 repeat [structural motif]
- pfam08513
Location:7 → 31
- LisH
-
NM_001374330.1 → NP_001361259.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (8), as well as variant 4, encodes isoform 2.
- Source sequence(s)
-
AC023235, AC078799, KF457713
- Consensus CDS
-
CCDS93428.1
- UniProtKB/TrEMBL
- B7Z475, C9JLJ1
- Related
- ENSP00000402402.2, ENST00000431421.6
- Conserved Domains (2) summary
-
- cd00200
Location:77 → 383
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:182 → 219
- 7WD40; WD40 repeat [structural motif]
-
NM_024665.7 → NP_078941.2 F-box-like/WD repeat-containing protein TBL1XR1 isoform 1
See identical proteins and their annotated locations for NP_078941.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1), as well as variants 2, 3, 5, 6, and 7, encodes isoform 1.
- Source sequence(s)
-
AC023235, AC078799, KF457713
- Consensus CDS
-
CCDS46961.1
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
- Related
- ENSP00000413251.3, ENST00000457928.7
- Conserved Domains (3) summary
-
- cd00200
Location:164 → 470
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:228 → 264
- 7WD40; WD40 repeat [structural motif]
- pfam08513
Location:7 → 31
- LisH
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
177019344..177201800 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047448940.1 → XP_047304896.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X1
- UniProtKB/TrEMBL
- B7Z475, C9JLJ1
-
XM_011513142.3 → XP_011511444.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
See identical proteins and their annotated locations for XP_011511444.1
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
- Conserved Domains (3) summary
-
- cd00200
Location:164 → 470
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- sd00039
Location:228 → 264
- 7WD40; WD40 repeat [structural motif]
- pfam08513
Location:7 → 31
- LisH
-
XM_047448941.1 → XP_047304897.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X2
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_047448949.1 → XP_047304905.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
- Related
- ENSP00000515886.1, ENST00000704384.1
-
XM_047448942.1 → XP_047304898.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X3
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_047448943.1 → XP_047304899.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X3
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_047448947.1 → XP_047304903.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
- Related
- ENSP00000486324.1, ENST00000631253.2
-
XM_047448945.1 → XP_047304901.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_047448946.1 → XP_047304902.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_047448944.1 → XP_047304900.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
179822332..180000612 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054347894.1 → XP_054203869.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_054347889.1 → XP_054203864.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X3
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_054347888.1 → XP_054203863.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X3
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_054347887.1 → XP_054203862.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X2
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_054347893.1 → XP_054203868.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_054347891.1 → XP_054203866.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_054347892.1 → XP_054203867.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63
-
XM_054347890.1 → XP_054203865.1 F-box-like/WD repeat-containing protein TBL1XR1 isoform X4
- UniProtKB/Swiss-Prot
- D3DNQ9, Q14DC3, Q9BZK7, Q9H2I1, Q9H9A1
- UniProtKB/TrEMBL
-
A0A0D9SF63