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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001142587.2 → NP_001136059.1 nuclear transcription factor Y subunit gamma isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon and uses an alternate splice site in the 3' coding region, compared to variant 1. The resulting isoform (3) has the same N- and C- termini but lacks an internal segment and one residue near the C-terminus, compared to isoform 1.
- Source sequence(s)
-
AB208975, AL354914, D89986, DC391720
- Consensus CDS
-
CCDS44121.1
- UniProtKB/Swiss-Prot
-
Q13952
- Related
- ENSP00000408867.2, ENST00000456393.6
- Conserved Domains (1) summary
-
- COG5208
Location:17 → 123
- HAP5; CCAAT-binding factor, subunit C [Transcription]
-
NM_001142588.2 → NP_001136060.1 nuclear transcription factor Y subunit gamma isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AC119677, AK300774, AL354914, D89986, DC391720
- Consensus CDS
-
CCDS44120.1
- UniProtKB/Swiss-Prot
-
Q13952
- Related
- ENSP00000396620.2, ENST00000425457.6
- Conserved Domains (1) summary
-
- cl28542
Location:17 → 123
- BUR6; Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]
-
NM_001142589.2 → NP_001136061.1 nuclear transcription factor Y subunit gamma isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks two alternate in-frame exons in the 5' and 3' coding regions, compared to variant 1. The resulting isoform (4) has the same N- and C- termini but lacks two internal segments, compared to isoform 1.
- Source sequence(s)
-
AB208975, AK301385, D89986
- Consensus CDS
-
CCDS44123.1
- UniProtKB/Swiss-Prot
-
Q13952
- Related
- ENSP00000408315.2, ENST00000427410.6
- Conserved Domains (1) summary
-
- COG5208
Location:17 → 85
- HAP5; CCAAT-binding factor, subunit C [Transcription]
-
NM_001142590.2 → NP_001136062.1 nuclear transcription factor Y subunit gamma isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) has an alternate splice pattern in the 5' UTR, lacks an alternate exon in the 3' coding region, and uses an alternate splice site in the central coding region, compared to variant 1. the resulting isoform (5) has the same N- and C- termini but lacks two internal segments, compared to isoform 1.
- Source sequence(s)
-
AC119677, AK127677, AL031289, AL354914, D89986, DC297902
- Consensus CDS
-
CCDS44122.1
- UniProtKB/Swiss-Prot
-
Q13952
- Related
- ENSP00000361737.1, ENST00000372653.5
- Conserved Domains (1) summary
-
- COG5208
Location:17 → 123
- HAP5; CCAAT-binding factor, subunit C [Transcription]
-
NM_001308114.1 → NP_001295043.1 nuclear transcription factor Y subunit gamma isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and uses an alternate in-frame splice acceptor site in the 3' terminal exon compared to variant 1. The resulting isoform (6) has the same N- and C- termini but contains an additional segment in the 3' coding region, compared to isoform 1.
- Source sequence(s)
-
AF191744, AK000346, BP230898, BU634106
- Consensus CDS
-
CCDS81305.1
- UniProtKB/Swiss-Prot
- B4DUS6, B4DW63, D3DPV9, F8VWM3, Q13952, Q59GY4, Q5T6K8, Q5T6K9, Q5T6L1, Q5TZR6, Q92869, Q9HBX1, Q9NXB5, Q9UM67, Q9UML0, Q9UMT7
- Related
- ENSP00000312617.5, ENST00000308733.9
- Conserved Domains (1) summary
-
- cl28542
Location:17 → 123
- BUR6; Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]
-
NM_001308115.2 → NP_001295044.1 nuclear transcription factor Y subunit gamma isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR, lacks an alternate in-frame exon in the central coding region, and uses an alternate in-frame splice acceptor site in the 3' terminal exon compared to variant 1. The resulting isoform (7) has the same N- and C- termini but lacks a segment in the central coding region, and contains an additional segment in the 3' coding region, compared to isoform 1.
- Source sequence(s)
-
AK000346, BP230898, BU634106
- Consensus CDS
-
CCDS81306.1
- UniProtKB/Swiss-Prot
-
Q13952
- Related
- ENSP00000361736.1, ENST00000372652.5
- Conserved Domains (1) summary
-
- pfam00808
Location:42 → 105
- CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone
-
NM_014223.5 → NP_055038.2 nuclear transcription factor Y subunit gamma isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The resulting isoform (2) has the same N- and C- termini but lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AC119677, BC005003, D89986, DC391720
- Consensus CDS
-
CCDS455.1
- UniProtKB/Swiss-Prot
-
Q13952
- Related
- ENSP00000404427.3, ENST00000447388.8
- Conserved Domains (1) summary
-
- COG5208
Location:17 → 123
- HAP5; CCAAT-binding factor, subunit C [Transcription]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
40691704..40771603
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017001365.3 → XP_016856854.1 nuclear transcription factor Y subunit gamma isoform X13
- UniProtKB/Swiss-Prot
- B4DUS6, B4DW63, D3DPV9, F8VWM3, Q13952, Q59GY4, Q5T6K8, Q5T6K9, Q5T6L1, Q5TZR6, Q92869, Q9HBX1, Q9NXB5, Q9UM67, Q9UML0, Q9UMT7
- Conserved Domains (1) summary
-
- cl28542
Location:17 → 123
- BUR6; Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]
-
XM_006710661.3 → XP_006710724.1 nuclear transcription factor Y subunit gamma isoform X2
- UniProtKB/Swiss-Prot
-
Q13952
- Conserved Domains (1) summary
-
- pfam00808
Location:42 → 105
- CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone
-
XM_047421386.1 → XP_047277342.1 nuclear transcription factor Y subunit gamma isoform X17
-
XM_047421368.1 → XP_047277324.1 nuclear transcription factor Y subunit gamma isoform X13
- UniProtKB/Swiss-Prot
- B4DUS6, B4DW63, D3DPV9, F8VWM3, Q13952, Q59GY4, Q5T6K8, Q5T6K9, Q5T6L1, Q5TZR6, Q92869, Q9HBX1, Q9NXB5, Q9UM67, Q9UML0, Q9UMT7
-
XM_047421353.1 → XP_047277309.1 nuclear transcription factor Y subunit gamma isoform X6
-
XM_047421376.1 → XP_047277332.1 nuclear transcription factor Y subunit gamma isoform X13
- UniProtKB/Swiss-Prot
- B4DUS6, B4DW63, D3DPV9, F8VWM3, Q13952, Q59GY4, Q5T6K8, Q5T6K9, Q5T6L1, Q5TZR6, Q92869, Q9HBX1, Q9NXB5, Q9UM67, Q9UML0, Q9UMT7
-
XM_047421347.1 → XP_047277303.1 nuclear transcription factor Y subunit gamma isoform X3
-
XM_047421359.1 → XP_047277315.1 nuclear transcription factor Y subunit gamma isoform X10
-
XM_047421357.1 → XP_047277313.1 nuclear transcription factor Y subunit gamma isoform X8
-
XM_047421358.1 → XP_047277314.1 nuclear transcription factor Y subunit gamma isoform X9
-
XM_047421389.1 → XP_047277345.1 nuclear transcription factor Y subunit gamma isoform X19
-
XM_047421390.1 → XP_047277346.1 nuclear transcription factor Y subunit gamma isoform X20
-
XM_047421351.1 → XP_047277307.1 nuclear transcription factor Y subunit gamma isoform X2
-
XM_047421348.1 → XP_047277304.1 nuclear transcription factor Y subunit gamma isoform X4
-
XM_006710660.4 → XP_006710723.2 nuclear transcription factor Y subunit gamma isoform X14
- UniProtKB/Swiss-Prot
-
Q13952
- Conserved Domains (1) summary
-
- cl28542
Location:17 → 123
- BUR6; Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]
-
XM_047421337.1 → XP_047277293.1 nuclear transcription factor Y subunit gamma isoform X2
-
XM_047421384.1 → XP_047277340.1 nuclear transcription factor Y subunit gamma isoform X15
- Related
- ENSP00000414299.2, ENST00000440226.7
-
XM_017001369.2 → XP_016856858.1 nuclear transcription factor Y subunit gamma isoform X15
- UniProtKB/Swiss-Prot
-
Q13952
- Related
- ENSP00000361734.1, ENST00000372651.5
- Conserved Domains (1) summary
-
- COG5208
Location:17 → 123
- HAP5; CCAAT-binding factor, subunit C [Transcription]
-
XM_017001366.3 → XP_016856855.1 nuclear transcription factor Y subunit gamma isoform X22
-
XM_047421385.1 → XP_047277341.1 nuclear transcription factor Y subunit gamma isoform X16
-
XM_047421391.1 → XP_047277347.1 nuclear transcription factor Y subunit gamma isoform X21
-
XM_024447356.2 → XP_024303124.1 nuclear transcription factor Y subunit gamma isoform X18
- Conserved Domains (1) summary
-
- cl28542
Location:87 → 193
- BUR6; Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]
-
XM_047421362.1 → XP_047277318.1 nuclear transcription factor Y subunit gamma isoform X11
-
XM_047421356.1 → XP_047277312.1 nuclear transcription factor Y subunit gamma isoform X7
-
XM_017001364.3 → XP_016856853.1 nuclear transcription factor Y subunit gamma isoform X12
-
XM_024447357.1 → XP_024303125.1 nuclear transcription factor Y subunit gamma isoform X15
- Conserved Domains (1) summary
-
- COG5208
Location:17 → 123
- HAP5; CCAAT-binding factor, subunit C [Transcription]
-
XM_006710658.4 → XP_006710721.3 nuclear transcription factor Y subunit gamma isoform X5
-
XM_047421373.1 → XP_047277329.1 nuclear transcription factor Y subunit gamma isoform X13
- UniProtKB/Swiss-Prot
- B4DUS6, B4DW63, D3DPV9, F8VWM3, Q13952, Q59GY4, Q5T6K8, Q5T6K9, Q5T6L1, Q5TZR6, Q92869, Q9HBX1, Q9NXB5, Q9UM67, Q9UML0, Q9UMT7
-
XM_005270895.5 → XP_005270952.4 nuclear transcription factor Y subunit gamma isoform X1
- Conserved Domains (1) summary
-
- cl28542
Location:103 → 209
- BUR6; Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
40560898..40640813
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054336774.1 → XP_054192749.1 nuclear transcription factor Y subunit gamma isoform X13
- UniProtKB/Swiss-Prot
- B4DUS6, B4DW63, D3DPV9, F8VWM3, Q13952, Q59GY4, Q5T6K8, Q5T6K9, Q5T6L1, Q5TZR6, Q92869, Q9HBX1, Q9NXB5, Q9UM67, Q9UML0, Q9UMT7
-
XM_054336778.1 → XP_054192753.1 nuclear transcription factor Y subunit gamma isoform X2
-
XM_054336782.1 → XP_054192757.1 nuclear transcription factor Y subunit gamma isoform X17
-
XM_054336767.1 → XP_054192742.1 nuclear transcription factor Y subunit gamma isoform X6
-
XM_054336776.1 → XP_054192751.1 nuclear transcription factor Y subunit gamma isoform X13
- UniProtKB/Swiss-Prot
- B4DUS6, B4DW63, D3DPV9, F8VWM3, Q13952, Q59GY4, Q5T6K8, Q5T6K9, Q5T6L1, Q5TZR6, Q92869, Q9HBX1, Q9NXB5, Q9UM67, Q9UML0, Q9UMT7
-
XM_054336763.1 → XP_054192738.1 nuclear transcription factor Y subunit gamma isoform X3
-
XM_054336771.1 → XP_054192746.1 nuclear transcription factor Y subunit gamma isoform X10
-
XM_054336769.1 → XP_054192744.1 nuclear transcription factor Y subunit gamma isoform X8
-
XM_054336770.1 → XP_054192745.1 nuclear transcription factor Y subunit gamma isoform X9
-
XM_054336784.1 → XP_054192759.1 nuclear transcription factor Y subunit gamma isoform X19
-
XM_054336785.1 → XP_054192760.1 nuclear transcription factor Y subunit gamma isoform X20
-
XM_054336766.1 → XP_054192741.1 nuclear transcription factor Y subunit gamma isoform X2
-
XM_054336764.1 → XP_054192739.1 nuclear transcription factor Y subunit gamma isoform X4
-
XM_054336777.1 → XP_054192752.1 nuclear transcription factor Y subunit gamma isoform X14
-
XM_054336762.1 → XP_054192737.1 nuclear transcription factor Y subunit gamma isoform X2
-
XM_054336779.1 → XP_054192754.1 nuclear transcription factor Y subunit gamma isoform X15
-
XM_054336781.1 → XP_054192756.1 nuclear transcription factor Y subunit gamma isoform X15
-
XM_054336787.1 → XP_054192762.1 nuclear transcription factor Y subunit gamma isoform X22
-
XM_054336780.1 → XP_054192755.1 nuclear transcription factor Y subunit gamma isoform X16
-
XM_054336786.1 → XP_054192761.1 nuclear transcription factor Y subunit gamma isoform X21
-
XM_054336783.1 → XP_054192758.1 nuclear transcription factor Y subunit gamma isoform X18
-
XM_054336772.1 → XP_054192747.1 nuclear transcription factor Y subunit gamma isoform X11
-
XM_054336768.1 → XP_054192743.1 nuclear transcription factor Y subunit gamma isoform X7
-
XM_054336773.1 → XP_054192748.1 nuclear transcription factor Y subunit gamma isoform X12
-
XM_054336788.1 → XP_054192763.1 nuclear transcription factor Y subunit gamma isoform X15
-
XM_054336765.1 → XP_054192740.1 nuclear transcription factor Y subunit gamma isoform X5
-
XM_054336775.1 → XP_054192750.1 nuclear transcription factor Y subunit gamma isoform X13
- UniProtKB/Swiss-Prot
- B4DUS6, B4DW63, D3DPV9, F8VWM3, Q13952, Q59GY4, Q5T6K8, Q5T6K9, Q5T6L1, Q5TZR6, Q92869, Q9HBX1, Q9NXB5, Q9UM67, Q9UML0, Q9UMT7
-
XM_054336761.1 → XP_054192736.1 nuclear transcription factor Y subunit gamma isoform X1