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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001003792.3 → NP_001003792.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3), also known as DD23-S, lacks a 3 nt segment and an in-frame exon in the coding region, as compared to variant 1. The encoded isoform 3 thus lacks an internal aa and an internal segment, as compared to isoform 1.
- Source sequence(s)
-
AC012262, AC021068, AC092795, AC097633, AC098650, AC099048, AK097311, AY236872, CA448021
- Consensus CDS
-
CCDS33725.1
- UniProtKB/Swiss-Prot
-
Q6XE24
- Related
- ENSP00000373276.2, ENST00000383766.6
- Conserved Domains (3) summary
-
- TIGR01628
Location:60 → 392
- PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
- cd12475
Location:138 → 225
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:56 → 135
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_001003793.3 → NP_001003793.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1), also known as DD23-L, encodes the longest isoform (1).
- Source sequence(s)
-
AC012262, AC097633, AK097311, AY236871, CA448021
- Consensus CDS
-
CCDS33724.1
- UniProtKB/Swiss-Prot
- A8K9S4, B7ZL17, G5E9J9, O75876, Q17RI0, Q6XE23, Q6XE24
- Related
- ENSP00000373277.2, ENST00000383767.7
- Conserved Domains (2) summary
-
- cd12475
Location:139 → 226
- RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12472
Location:57 → 136
- RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
NM_001177711.2 → NP_001171182.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an in-frame exon in the coding region, compared to variant 1. The encoded isoform (5) is shorter than isoform 1.
- Source sequence(s)
-
AC012262, AC097633, AC099048, AK097311, AK292789, CA448021
- Consensus CDS
-
CCDS54558.1
- UniProtKB/Swiss-Prot
-
Q6XE24
- Related
- ENSP00000397926.1, ENST00000452462.5
- Conserved Domains (3) summary
-
- TIGR01628
Location:61 → 394
- PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
- cd12475
Location:139 → 226
- RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12472
Location:57 → 136
- RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
NM_001177712.2 → NP_001171183.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 3' UTR and has multiple differences in the coding region, compared to variant 1. The encoded isoform (4) is shorter and lacks the last aa, compared to isoform 1.
- Source sequence(s)
-
AC012262, AW779062, BC117315
- Consensus CDS
-
CCDS54557.1
- UniProtKB/Swiss-Prot
-
Q6XE24
- Related
- ENSP00000400519.1, ENST00000456853.1
- Conserved Domains (2) summary
-
- cd12475
Location:139 → 226
- RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12472
Location:57 → 136
- RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
NM_001330696.1 → NP_001317625.1 RNA-binding motif, single-stranded-interacting protein 3 isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) contains an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform 6, which is shorter by an amino acid, compared to isoform 1.
- Source sequence(s)
-
AC012262, AC021068, AC092795, AC092796, AC097633, AC098650, AC099048, CA448021
- Consensus CDS
-
CCDS87056.1
- UniProtKB/TrEMBL
-
C9JIJ9
- Related
- ENSP00000395592.1, ENST00000434693.6
- Conserved Domains (2) summary
-
- cd12475
Location:138 → 225
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:56 → 135
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_014483.4 → NP_055298.2 RNA-binding motif, single-stranded-interacting protein 3 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an internal in-frame exon and the last 3' exon, but has an alternate 3' segment, as compared to variant 1. The encoded isoform 2 lacks an internal segment and the last aa, as compared to isoform 1.
- Source sequence(s)
-
AC012262, AF023259, AW779062
- Consensus CDS
-
CCDS33726.1
- UniProtKB/Swiss-Prot
-
Q6XE24
- Related
- ENSP00000273139.9, ENST00000273139.13
- Conserved Domains (3) summary
-
- TIGR01628
Location:61 → 394
- PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
- cd12475
Location:139 → 226
- RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12472
Location:57 → 136
- RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
29281071..30010395
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005265061.3 → XP_005265118.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X3
- Conserved Domains (3) summary
-
- cd12475
Location:139 → 226
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:57 → 136
- RRM_SF; RNA recognition motif (RRM) superfamily
- cl25887
Location:61 → 393
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
-
XM_017006180.2 → XP_016861669.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X5
- Conserved Domains (3) summary
-
- TIGR01645
Location:83 → 374
- half-pint; poly-U binding splicing factor, half-pint family
- cd12475
Location:139 → 226
- RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12472
Location:57 → 136
- RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
XM_017006179.2 → XP_016861668.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X2
- Conserved Domains (3) summary
-
- TIGR01628
Location:60 → 393
- PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
- cd12475
Location:138 → 225
- RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12472
Location:56 → 135
- RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
XM_017006181.2 → XP_016861670.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X6
-
XM_024453454.2 → XP_024309222.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X1
- Conserved Domains (2) summary
-
- cd12475
Location:139 → 226
- RRM2_RBMS3; RNA recognition motif 2 (RRM2) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cd12472
Location:57 → 136
- RRM1_RBMS3; RNA recognition motif 1 (RRM1) found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
XM_005265062.2 → XP_005265119.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X4
- Conserved Domains (3) summary
-
- cd12475
Location:139 → 226
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
- cl17169
Location:57 → 136
- RRM_SF; RNA recognition motif (RRM) superfamily
- cl25887
Location:61 → 393
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
-
XM_047447976.1 → XP_047303932.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X7
-
XM_005265063.3 → XP_005265120.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X7
- Conserved Domains (1) summary
-
- cd12475
Location:44 → 131
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
-
XM_005265065.6 → XP_005265122.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X8
- Conserved Domains (1) summary
-
- cd12475
Location:30 → 117
- RRM2_RBMS3; RNA recognition motif 2 found in vertebrate RNA-binding motif, single-stranded-interacting protein 3 (RBMS3)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
29283417..30012800
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054346191.1 → XP_054202166.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X3
-
XM_054346193.1 → XP_054202168.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X5
-
XM_054346190.1 → XP_054202165.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X2
-
XM_054346194.1 → XP_054202169.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X6
-
XM_054346189.1 → XP_054202164.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X1
-
XM_054346192.1 → XP_054202167.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X4
-
XM_054346196.1 → XP_054202171.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X7
-
XM_054346195.1 → XP_054202170.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X7
-
XM_054346197.1 → XP_054202172.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X7
-
XM_054346198.1 → XP_054202173.1 RNA-binding motif, single-stranded-interacting protein 3 isoform X8