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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001305803.1 → NP_001292732.1 alpha-tocopherol transfer protein-like isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and uses an alternate in-frame splice site at an internal exon compared to variant 1. It encodes isoform 2, which is shorter than isoform 1.
- Source sequence(s)
-
AK033600, BC052389, BC060726, CK640285
- UniProtKB/Swiss-Prot
-
Q9D3D0
- Conserved Domains (2) summary
-
- smart01100
Location:57 → 103
- CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
- cd00170
Location:122 → 272
- SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
-
NM_029512.2 → NP_083788.2 alpha-tocopherol transfer protein-like isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1 and 2 encode the same isoform.
- Source sequence(s)
-
AK043791, BC052389, BC060726, CJ183358
- Consensus CDS
-
CCDS38317.1
- UniProtKB/Swiss-Prot
- A6PW51, Q3U0R3, Q7TS94, Q9D3D0
- Related
- ENSMUSP00000128922.2, ENSMUST00000171696.8
- Conserved Domains (2) summary
-
- smart01100
Location:57 → 103
- CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
- cd00170
Location:122 → 278
- SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
-
NM_181734.3 → NP_859423.2 alpha-tocopherol transfer protein-like isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same isoform (1).
- Source sequence(s)
-
AK039450, BC052389
- Consensus CDS
-
CCDS38317.1
- UniProtKB/Swiss-Prot
- A6PW51, Q3U0R3, Q7TS94, Q9D3D0
- Related
- ENSMUSP00000105035.4, ENSMUST00000109408.10
- Conserved Domains (2) summary
-
- smart01100
Location:57 → 103
- CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
- cd00170
Location:122 → 278
- SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
RNA
-
NR_131225.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate internal splice site and lacks an internal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK039450, BC052389, BC060726, BY717985
- Related
-
ENSMUST00000109405.10
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
163444206..163460933
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006500362.3 → XP_006500425.1 alpha-tocopherol transfer protein-like isoform X1
- UniProtKB/Swiss-Prot
- A6PW51, Q3U0R3, Q7TS94, Q9D3D0
- Conserved Domains (2) summary
-
- smart01100
Location:57 → 103
- CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
- cd00170
Location:122 → 278
- SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
-
XM_006500361.3 → XP_006500424.1 alpha-tocopherol transfer protein-like isoform X1
- UniProtKB/Swiss-Prot
- A6PW51, Q3U0R3, Q7TS94, Q9D3D0
- Conserved Domains (2) summary
-
- smart01100
Location:57 → 103
- CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
- cd00170
Location:122 → 278
- SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
-
XM_036162662.1 → XP_036018555.1 alpha-tocopherol transfer protein-like isoform X2
- Conserved Domains (2) summary
-
- smart01100
Location:57 → 103
- CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
- cd00170
Location:122 → 272
- SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
-
XM_017319317.3 → XP_017174806.1 alpha-tocopherol transfer protein-like isoform X2
- Conserved Domains (2) summary
-
- smart01100
Location:57 → 103
- CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
- cd00170
Location:122 → 272
- SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
RNA
-
XR_003953734.2 RNA Sequence
-
XR_003953735.2 RNA Sequence
-
XR_374538.5 RNA Sequence
-
XR_003953736.2 RNA Sequence