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Links from GEO Profiles

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    Nrm nurim (nuclear envelope membrane protein) [ Mus musculus (house mouse) ]

    Gene ID: 106582, updated on 4-Jan-2025

    Summary

    Official Symbol
    Nrmprovided by MGI
    Official Full Name
    nurim (nuclear envelope membrane protein)provided by MGI
    Primary source
    MGI:MGI:2146855
    See related
    Ensembl:ENSMUSG00000059791 AllianceGenome:MGI:2146855
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2610307M02Rik
    Summary
    Predicted to be located in nuclear envelope. Predicted to be active in nuclear membrane. Is expressed in several structures, including brain ventricular layer; cranium; heart; metanephros; and nasal capsule. Human ortholog(s) of this gene implicated in alcohol dependence. Orthologous to human NRM (nurim). [provided by Alliance of Genome Resources, Jan 2025]
    Expression
    Broad expression in testis adult (RPKM 84.9), spleen adult (RPKM 32.1) and 21 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Nrm in Genome Data Viewer
    Location:
    17 B1; 17 18.72 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (36171987..36176292)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (35860311..35865400)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_42478 Neighboring gene tubulin, beta 5 class I Neighboring gene STARR-positive B cell enhancer ABC_E5607 Neighboring gene STARR-seq mESC enhancer starr_42479 Neighboring gene mediator of DNA damage checkpoint 1 Neighboring gene STARR-seq mESC enhancer starr_42480 Neighboring gene protein phosphatase 1, regulatory subunit 18 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:36016615-36016802 Neighboring gene DEAH-box helicase 16

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    General gene information

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in nuclear envelope  
    located_in nuclear envelope  
    located_in nuclear inner membrane PubMed 
    located_in nuclear lamina PubMed 
    is_active_in nuclear membrane  
    located_in nuclear membrane  

    General protein information

    Preferred Names
    nurim
    Names
    nuclear envelope membrane protein
    nuclear rim protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134122.2NP_598883.1  nurim

      See identical proteins and their annotated locations for NP_598883.1

      Status: PROVISIONAL

      Source sequence(s)
      BC021750
      Consensus CDS
      CCDS28708.1
      UniProtKB/Swiss-Prot
      Q8VC65
      Related
      ENSMUSP00000073873.9, ENSMUST00000074259.15

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      36171987..36176292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030249416.2XP_030105276.1  nurim isoform X1

      UniProtKB/TrEMBL
      G3UWN3
      Related
      ENSMUSP00000133355.2, ENSMUST00000174873.2
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