U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FGFBP2 fibroblast growth factor binding protein 2 [ Homo sapiens (human) ]

    Gene ID: 83888, updated on 10-Dec-2024

    Summary

    Official Symbol
    FGFBP2provided by HGNC
    Official Full Name
    fibroblast growth factor binding protein 2provided by HGNC
    Primary source
    HGNC:HGNC:29451
    See related
    Ensembl:ENSG00000137441 MIM:607713; AllianceGenome:HGNC:29451
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    KSP37; HBP17RP
    Summary
    This gene encodes a member of the fibroblast growth factor binding protein family. The encoded protein is a serum protein that is selectively secreted by cytotoxic lymphocytes and may be involved in cytotoxic lymphocyte-mediated immunity. An increase in the amount of gene product may be associated with atopic asthma and mild extrinsic asthma.[provided by RefSeq Staff, Oct 2008]
    Expression
    Biased expression in bone marrow (RPKM 17.7), spleen (RPKM 6.7) and 7 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See FGFBP2 in Genome Data Viewer
    Location:
    4p15.32
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (15960245..15963175, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (15941926..15944856, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (15961868..15964798, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene hypoxanthine phosphoribosyltransferase 1 pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:15911215-15911375 Neighboring gene fibroblast growth factor binding protein 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:15964828-15965669 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr4:15982103-15982696 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:15982697-15983289 Neighboring gene prominin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene Sharpr-MPRA regulatory region 9620 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:16069501-16070094 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:16078051-16078768 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:16078769-16079486 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21346 Neighboring gene uncharacterized LOC107986261

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    Generalization of variants identified by genome-wide association studies for electrocardiographic traits in African Americans.
    EBI GWAS Catalog

    HIV-1 interactions

    Protein interactions

    Protein Gene Interaction Pubs
    Vif vif HIV-1 Vif downregulates the expression of fibroblast growth factor binding protein 2 (FGFBP2) in Vif-expression T cells PubMed

    Go to the HIV-1, Human Interaction Database

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables growth factor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    fibroblast growth factor-binding protein 2
    Names
    37 kDa killer-specific secretory protein
    FGF-BP2
    FGF-binding protein 2
    FGFBP-2
    HBp17-RP
    HBp17-related protein
    killer-specific secretory protein of 37 kDa

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_031950.4NP_114156.1  fibroblast growth factor-binding protein 2 precursor

      See identical proteins and their annotated locations for NP_114156.1

      Status: REVIEWED

      Source sequence(s)
      AC005598, AY358978, CN480296
      Consensus CDS
      CCDS3419.1
      UniProtKB/Swiss-Prot
      Q9BYJ0
      Related
      ENSP00000259989.6, ENST00000259989.7
      Conserved Domains (1) summary
      pfam06473
      Location:9223
      FGF-BP1; FGF binding protein 1 (FGF-BP1)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      15960245..15963175 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      15941926..15944856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)