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    LINC02805 long intergenic non-protein coding RNA 2805 [ Homo sapiens (human) ]

    Gene ID: 100505824, updated on 10-Dec-2024

    Summary

    Official Symbol
    LINC02805provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2805provided by HGNC
    Primary source
    HGNC:HGNC:54339
    See related
    Ensembl:ENSG00000232265 AllianceGenome:HGNC:54339
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 12.6) See more
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    Genomic context

    See LINC02805 in Genome Data Viewer
    Location:
    1q21.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (148162710..148163413)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (146644006..146644709, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147634989..147635692)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NBPF member 11 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1637 Neighboring gene ABHD17A pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1638 Neighboring gene uncharacterized LOC105371227 Neighboring gene RNA, 5S ribosomal pseudogene 57 Neighboring gene uncharacterized LOC101927468 Neighboring gene NANOG hESC enhancer GRCh37_chr1:147691416-147691917 Neighboring gene NANOG hESC enhancer GRCh37_chr1:147710223-147710724

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_135559.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AI917728, BC033999
      Related
      ENST00000411978.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      148162710..148163413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      146644006..146644709 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)