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    Chmp1 Charged multivesicular body protein 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40036, updated on 9-Dec-2024

    Summary

    Official Symbol
    Chmp1provided by FlyBase
    Official Full Name
    Charged multivesicular body protein 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0036805
    Locus tag
    Dmel_CG4108
    See related
    AllianceGenome:FB:FBgn0036805
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4108; CHMP1; Dmel\CG4108; VPS46
    Summary
    Predicted to be involved in endosome transport via multivesicular body sorting pathway; late endosome to vacuole transport; and protein transport. Located in apical part of cell and late endosome. Is expressed in adult head. Orthologous to human CHMP1B (charged multivesicular body protein 1B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Chmp1 in Genome Data Viewer
    Location:
    75D6-75D6; 3-45 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (18682895..18684061, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (18675995..18677161, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene SAGA associated factor 11kDa Neighboring gene uncharacterized protein Neighboring gene Cytochrome P450 12c1 Neighboring gene long non-coding RNA:CR43987

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in endosome transport via multivesicular body sorting pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in endosome transport via multivesicular body sorting pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in late endosome to vacuole transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vacuolar transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of ESCRT III complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in apical part of cell IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in late endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in late endosome ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in multivesicular body IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    charged multivesicular body protein 1
    Names
    CG4108-PA
    CG4108-PB
    Chmp1-PA
    Chmp1-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      18682895..18684061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300179.1NP_001287108.1  charged multivesicular body protein 1, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287108.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95SH2, Q9VVR8
      Conserved Domains (1) summary
      cl21588
      Location:42167
      Snf7
    2. NM_140794.3NP_649051.3  charged multivesicular body protein 1, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649051.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95SH2, Q9VVR8
      Related
      FBpp0074859
      Conserved Domains (1) summary
      cl21588
      Location:42167
      Snf7