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    CG12439 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34234, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG12439provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032094
    Locus tag
    Dmel_CG12439
    See related
    AllianceGenome:FB:FBgn0032094
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:AT16114; Dmel\CG12439
    Orthologs
    all
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    Genomic context

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    See CG12439 in Genome Data Viewer
    Location:
    30A1-30A1; 2-35 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9077121..9077988)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9077121..9077988)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44352 Neighboring gene uncharacterized protein Neighboring gene Dpr-interacting protein zeta Neighboring gene long non-coding RNA:CR44483 Neighboring gene Toll-4 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    2. The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster. Jehrke L, et al. Sci Rep, 2018 Apr 18. PMID 29670218, Free PMC Article
    3. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12439-PA
    CG12439-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      9077121..9077988
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298845.1 → NP_001285774.1  uncharacterized protein Dmel_CG12439, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285774.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T8Y6, Q9VLE7
      Conserved Domains (1) summary
      pfam16089
      Location:49 → 130
      DUF4818; Domain of unknown function (DUF4818)

    2. NM_135430.2 → NP_609274.2  uncharacterized protein Dmel_CG12439, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609274.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T8Y6, Q9VLE7
      Related
      FBpp0079368, FBtr0079767
      Conserved Domains (1) summary
      pfam16089
      Location:49 → 130
      DUF4818; Domain of unknown function (DUF4818)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8T8Y6 Q8T8Y6
    Q9VLE7 Q9VLE7

    Gene LinkOut

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