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    Tcs3 Probable tRNA N6-adenosine threonylcarbamoyltransferase Tcs3 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1270132, updated on 22-Jun-2024

    Summary

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    Gene symbol
    Tcs3
    Gene description
    Probable tRNA N6-adenosine threonylcarbamoyltransferase Tcs3
    See related
    VectorBase:AGAMI1_011328
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP006952
    Orthologs
    fruit fly all
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    Genomic context

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    See Tcs3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (109007927..109009233)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C3orf38 homolog Neighboring gene protein YIPF1 Neighboring gene mitochondrial ribosomal protein S34 Neighboring gene uncharacterized LOC1270130 Neighboring gene uncharacterized LOC3290275

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in tRNA threonylcarbamoyladenosine modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of EKC/KEOPS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA N6-adenosine threonylcarbamoyltransferase
    Names
    AGAP006952-PA
    tRNA threonylcarbamoyladenosine biosynthesis protein KAE1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      109007927..109009233
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_308804.5 → XP_308804.2  tRNA N6-adenosine threonylcarbamoyltransferase

      UniProtKB/TrEMBL
      Q7QIM5
      Conserved Domains (2) summary
      PTZ00340
      Location:2 → 345
      PTZ00340; O-sialoglycoprotein endopeptidase-like protein; Provisional
      cl22532
      Location:7 → 108
      Carbam_trans_N; Carbamoyltransferase N-terminus
    Nucleotide Protein Strain
    Heading Accession and Version

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