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    LOC4576491 E3 ubiquitin-protein ligase AMFR [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 4576491, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC4576491
    Gene description
    E3 ubiquitin-protein ligase AMFR
    See related
    VectorBase:AGAMI1_013392
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP007538
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    Genomic context

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    See LOC4576491 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (116100709..116124295)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene mediator of RNA polymerase II transcription subunit 12 Neighboring gene mucin-19 Neighboring gene uncharacterized LOC133391409 Neighboring gene homeobox protein PKNOX2 Neighboring gene dnaJ homolog subfamily C member 2 Neighboring gene integrator complex subunit 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum unfolded protein response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K48-linked ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase AMFR
    Names
    AGAP007538-PA
    autocrine motility factor receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      116100709..116124295
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061650972.1 → XP_061506956.1  E3 ubiquitin-protein ligase AMFR isoform X1

      UniProtKB/TrEMBL
      A0NBH3

    2. XM_061650974.1 → XP_061506958.1  E3 ubiquitin-protein ligase AMFR isoform X2

      UniProtKB/TrEMBL
      A0NBH3

    3. XM_061650975.1 → XP_061506959.1  E3 ubiquitin-protein ligase AMFR isoform X2

      UniProtKB/TrEMBL
      A0NBH3

    4. XM_061650977.1 → XP_061506961.1  E3 ubiquitin-protein ligase AMFR isoform X2

      UniProtKB/TrEMBL
      A0NBH3

    5. XM_061650976.1 → XP_061506960.1  E3 ubiquitin-protein ligase AMFR isoform X2

      UniProtKB/TrEMBL
      A0NBH3

    6. XM_061650973.1 → XP_061506957.1  E3 ubiquitin-protein ligase AMFR isoform X1

      UniProtKB/TrEMBL
      A0NBH3
    Nucleotide Protein Strain
    Heading Accession and Version

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