U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Alh coiled coil domain containing protein Alhambra [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1281722, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Alh
    Gene description
    coiled coil domain containing protein Alhambra
    See related
    VectorBase:AGAMI1_006379
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP001451
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Alh in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (5119405..5136997, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC11176018 Neighboring gene ELMO domain-containing protein 2 Neighboring gene ubiquitin-conjugating enzyme E2 Q2 Neighboring gene TATA box-binding protein-associated factor RNA polymerase I subunit C-like Neighboring gene mitochondrial import inner membrane translocase subunit Tim29

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    hornerin; mucin-19; protein AF-10
    Names
    AGAP001451-PA
    AGAP001451-PB
    AGAP001451-PC

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      5119405..5136997 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061647514.1 → XP_061503498.1  mucin-19 isoform X13

    2. XM_061647506.1 → XP_061503490.1  hornerin isoform X5

      UniProtKB/TrEMBL
      F5HMP9

    3. XM_061647513.1 → XP_061503497.1  hornerin isoform X12

    4. XM_061647510.1 → XP_061503494.1  mucin-19 isoform X9

      UniProtKB/TrEMBL
      F5HMP9

    5. XM_061647501.1 → XP_061503485.1  hornerin isoform X2

      UniProtKB/TrEMBL
      F5HMP9

    6. XM_061647512.1 → XP_061503496.1  mucin-19 isoform X11

    7. XM_061647509.1 → XP_061503493.1  mucin-19 isoform X8

      UniProtKB/TrEMBL
      F5HMP9

    8. XM_061647505.1 → XP_061503489.1  hornerin isoform X4

      UniProtKB/TrEMBL
      F5HMP9

    9. XM_061647504.1 → XP_061503488.1  hornerin isoform X3

      UniProtKB/TrEMBL
      F5HMP9

    10. XM_061647500.1 → XP_061503484.1  hornerin isoform X1

      UniProtKB/TrEMBL
      F5HMP9

    11. XM_061647507.1 → XP_061503491.1  hornerin isoform X6

      UniProtKB/TrEMBL
      F5HMP9

    12. XM_061647515.1 → XP_061503499.1  hornerin isoform X14

    13. XM_061647508.1 → XP_061503492.1  hornerin isoform X7

      UniProtKB/TrEMBL
      F5HMP9

    14. XM_061647519.1 → XP_061503503.1  protein AF-10 isoform X18

    15. XM_061647518.1 → XP_061503502.1  protein AF-10 isoform X17

    16. XM_061647517.1 → XP_061503501.1  protein AF-10 isoform X16

      UniProtKB/TrEMBL
      Q7PKP4

    17. XM_061647516.1 → XP_061503500.1  protein AF-10 isoform X15

      UniProtKB/TrEMBL
      Q7PKP4

    18. XM_061647511.1 → XP_061503495.1  hornerin isoform X10

      UniProtKB/TrEMBL
      F5HMQ0
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.