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    BBS5 Bardet-Biedl syndrome 5 protein [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1281875, updated on 22-Jun-2024

    Summary

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    Gene symbol
    BBS5
    Gene description
    Bardet-Biedl syndrome 5 protein
    See related
    VectorBase:AGAMI1_003675
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP001301
    Orthologs
    fruit fly all
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    Genomic context

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    See BBS5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (2655550..2656793, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene Scaffold attachment factor B Neighboring gene geranylgeranyl transferase type-2 subunit beta Neighboring gene transmembrane protein 256 homolog Neighboring gene GDP-mannose pyrophosphorylase B Neighboring gene RNA polymerase II-associated factor 1-like protein antimeros Neighboring gene putative odorant-binding protein A10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BBSome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Bardet-Biedl syndrome 5 protein homolog
    Names
    AGAP001301-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      2655550..2656793 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_321845.6 → XP_321845.5  Bardet-Biedl syndrome 5 protein homolog

      See identical proteins and their annotated locations for XP_321845.5

      UniProtKB/TrEMBL
      Q7PUL7
      Conserved Domains (1) summary
      pfam07289
      Location:6 → 340
      BBL5; Bardet-Biedl syndrome 5 protein
    Nucleotide Protein Strain
    Heading Accession and Version

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